GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Gata3 Links NCBI RGD Ensembl	ENSRNOG00000019336	GATA binding protein 3

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Gata3	rn6_v1_chr17_+_72429618_72429618	-0.43	4.6e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr1_-_170186462 Show fit	0.31	ENSRNOT00000035798	Olr202 Links NCBI RGD Ensembl Show fit	olfactory receptor 202
chr7_-_143353925 Show fit	0.27	ENSRNOT00000068533	Krt71 Links NCBI RGD Ensembl Show fit	keratin 71
chr5_+_154800226 Show fit	0.24	ENSRNOT00000016046	Htr1d Links NCBI RGD Ensembl Show fit	5-hydroxytryptamine receptor 1D
chr7_+_112057030 Show fit	0.24	ENSRNOT00000035216	AABR07058366.1 Links NCBI RGD Ensembl Show fit
chr17_+_23661429 Show fit	0.22	ENSRNOT00000046523	Phactr1 Links NCBI RGD Ensembl Show fit	phosphatase and actin regulator 1
chr10_-_75187507 Show fit	0.20	ENSRNOT00000040681	Olr1521 Links NCBI RGD Ensembl Show fit	olfactory receptor 1521
chr15_+_41937880 Show fit	0.19	ENSRNOT00000032514	Kcnrg Links NCBI RGD Ensembl Show fit	potassium channel regulator
chr7_-_2961873 Show fit	0.19	ENSRNOT00000067441	Rps15-ps2 Links NCBI RGD Ensembl Show fit	ribosomal protein S15, pseudogene 2
chr2_+_251534535 Show fit	0.17	ENSRNOT00000080311	AABR07013701.1 Links NCBI RGD Ensembl Show fit
chr2_-_210943620 Show fit	0.17	ENSRNOT00000026750	Gpr61 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 61
chr6_+_55085313 Show fit	0.17	ENSRNOT00000005458	AABR07063901.1 Links NCBI RGD Ensembl Show fit
chrX_-_106607352 Show fit	0.17	ENSRNOT00000082858	AABR07040624.1 Links NCBI RGD Ensembl Show fit
chr12_-_19254527 Show fit	0.16	ENSRNOT00000089349	AABR07035541.3 Links NCBI RGD Ensembl Show fit
chr3_+_64190973 Show fit	0.16	ENSRNOT00000011342	AABR07052587.1 Links NCBI RGD Ensembl Show fit
chr1_+_72889270 Show fit	0.16	ENSRNOT00000058843 ENSRNOT00000034957	Tnnt1 Links NCBI RGD Ensembl Show fit	troponin T1, slow skeletal type
chr1_+_170205591 Show fit	0.16	ENSRNOT00000071063	LOC686660 Links NCBI RGD Ensembl Show fit	similar to olfactory receptor 692
chr18_-_6587080 Show fit	0.15	ENSRNOT00000040815	LOC103694404 Links NCBI RGD Ensembl Show fit	60S ribosomal protein L39
chr3_+_134440195 Show fit	0.15	ENSRNOT00000072928	AABR07054000.1 Links NCBI RGD Ensembl Show fit
chr2_+_153803349 Show fit	0.15	ENSRNOT00000088565	Mme Links NCBI RGD Ensembl Show fit	membrane metallo-endopeptidase
chr13_-_103080920 Show fit	0.15	ENSRNOT00000034990	AABR07022022.1 Links NCBI RGD Ensembl Show fit
chr15_-_45927804 Show fit	0.15	ENSRNOT00000086271	Ints6 Links NCBI RGD Ensembl Show fit	integrator complex subunit 6
chr1_-_101664436 Show fit	0.14	ENSRNOT00000028522	Sec1 Links NCBI RGD Ensembl Show fit	secretory blood group 1
chr3_-_52998650 Show fit	0.14	ENSRNOT00000009988	RGD1560831 Links NCBI RGD Ensembl Show fit	similar to 40S ribosomal protein S3
chr1_-_167884690 Show fit	0.14	ENSRNOT00000091372	Olr61 Links NCBI RGD Ensembl Show fit	olfactory receptor 61
chr9_-_73948583 Show fit	0.14	ENSRNOT00000018097	Myl1 Links NCBI RGD Ensembl Show fit	myosin, light chain 1
chr5_+_58661049 Show fit	0.14	ENSRNOT00000078274	Unc13b Links NCBI RGD Ensembl Show fit	unc-13 homolog B
chr2_-_117666683 Show fit	0.13	ENSRNOT00000015479	AABR07009931.1 Links NCBI RGD Ensembl Show fit
chr16_+_39827749 Show fit	0.13	ENSRNOT00000074885	Wdr17 Links NCBI RGD Ensembl Show fit	WD repeat domain 17
chr10_+_68588789 Show fit	0.12	ENSRNOT00000049614	AABR07030122.1 Links NCBI RGD Ensembl Show fit
chr15_-_70399924 Show fit	0.12	ENSRNOT00000087940	Diaph3 Links NCBI RGD Ensembl Show fit	diaphanous-related formin 3
chr9_-_92963697 Show fit	0.12	ENSRNOT00000023546	Gpr55 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 55
chr1_-_198008893 Show fit	0.12	ENSRNOT00000025950	Il27 Links NCBI RGD Ensembl Show fit	interleukin 27
chr2_-_157058194 Show fit	0.12	ENSRNOT00000076409	Rn50_2_1765.1 Links NCBI RGD Ensembl Show fit
chr2_-_208225888 Show fit	0.12	ENSRNOT00000054860	AABR07012775.1 Links NCBI RGD Ensembl Show fit
chr2_-_220838905 Show fit	0.12	ENSRNOT00000078914	AABR07013065.1 Links NCBI RGD Ensembl Show fit
chr2_-_123851854 Show fit	0.12	ENSRNOT00000023327	Il2 Links NCBI RGD Ensembl Show fit	interleukin 2
chr3_-_107760550 Show fit	0.12	ENSRNOT00000077091 ENSRNOT00000051638	Meis2 Links NCBI RGD Ensembl Show fit	Meis homeobox 2
chr2_+_189714754 Show fit	0.11	ENSRNOT00000086285	Gatad2b Links NCBI RGD Ensembl Show fit	GATA zinc finger domain containing 2B
chr5_-_57896475 Show fit	0.11	ENSRNOT00000017903	RGD1561916 Links NCBI RGD Ensembl Show fit	similar to testes development-related NYD-SP22 isoform 1
chr3_-_161299024 Show fit	0.11	ENSRNOT00000021216	Neurl2 Links NCBI RGD Ensembl Show fit	neuralized E3 ubiquitin protein ligase 2
chr19_+_38162515 Show fit	0.11	ENSRNOT00000027117	Slc7a6 Links NCBI RGD Ensembl Show fit	solute carrier family 7 member 6
chr4_-_132111079 Show fit	0.11	ENSRNOT00000013719	Eif4e3 Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 4E family member 3
chr5_+_173148884 Show fit	0.11	ENSRNOT00000041753	LOC100364191 Links NCBI RGD Ensembl Show fit	hCG1994130-like
chr6_-_91581262 Show fit	0.11	ENSRNOT00000034507	AABR07064716.1 Links NCBI RGD Ensembl Show fit
chr12_-_51965779 Show fit	0.11	ENSRNOT00000056733	LOC100362927 Links NCBI RGD Ensembl Show fit	replication protein A3-like
chr7_-_119896925 Show fit	0.11	ENSRNOT00000010609	Elfn2 Links NCBI RGD Ensembl Show fit	extracellular leucine-rich repeat and fibronectin type III domain containing 2
chr9_-_49448168 Show fit	0.11	ENSRNOT00000059478	AABR07067499.1 Links NCBI RGD Ensembl Show fit
chr7_-_50638798 Show fit	0.11	ENSRNOT00000048880	Syt1 Links NCBI RGD Ensembl Show fit	synaptotagmin 1
chr17_-_21677477 Show fit	0.11	ENSRNOT00000035448	Gcnt2 Links NCBI RGD Ensembl Show fit	glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
chr1_+_164706276 Show fit	0.11	ENSRNOT00000024311	Olr36 Links NCBI RGD Ensembl Show fit	olfactory receptor 36
chr6_-_135251073 Show fit	0.11	ENSRNOT00000088986	Mok Links NCBI RGD Ensembl Show fit	MOK protein kinase
chr1_+_80777014 Show fit	0.11	ENSRNOT00000079758	Gm19345 Links NCBI RGD Ensembl Show fit	predicted gene, 19345
chr2_-_102919567 Show fit	0.11	ENSRNOT00000072162	LOC100361143 Links NCBI RGD Ensembl Show fit	ribosomal protein L30-like
chr7_-_107223047 Show fit	0.11	ENSRNOT00000007250 ENSRNOT00000084875	Lrrc6 Links NCBI RGD Ensembl Show fit	leucine rich repeat containing 6
chr2_-_195712461 Show fit	0.11	ENSRNOT00000056449	Riiad1 Links NCBI RGD Ensembl Show fit	regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1
chr2_-_140618405 Show fit	0.10	ENSRNOT00000017736	Setd7 Links NCBI RGD Ensembl Show fit	SET domain containing (lysine methyltransferase) 7
chr16_+_70644474 Show fit	0.10	ENSRNOT00000045955	LOC100359503 Links NCBI RGD Ensembl Show fit	ribosomal protein S28-like
chr3_+_260653 Show fit	0.10	ENSRNOT00000006710	AABR07051190.1 Links NCBI RGD Ensembl Show fit
chr6_+_76349362 Show fit	0.10	ENSRNOT00000043224	Aldoart2 Links NCBI RGD Ensembl Show fit	aldolase 1 A retrogene 2
chr2_-_149333597 Show fit	0.10	ENSRNOT00000066948	P2ry14 Links NCBI RGD Ensembl Show fit	purinergic receptor P2Y14
chr8_-_70436028 Show fit	0.10	ENSRNOT00000077152	Slc24a1 Links NCBI RGD Ensembl Show fit	solute carrier family 24 member 1
chr4_+_172709724 Show fit	0.10	ENSRNOT00000010707	Igbp1b Links NCBI RGD Ensembl Show fit	immunoglobulin (CD79A) binding protein 1b
chr5_-_147635789 Show fit	0.10	ENSRNOT00000037106	Zbtb8b Links NCBI RGD Ensembl Show fit	zinc finger and BTB domain containing 8b
chr4_-_119591817 Show fit	0.10	ENSRNOT00000048768	AC097129.1 Links NCBI RGD Ensembl Show fit
chr4_+_120672152 Show fit	0.10	ENSRNOT00000077231	Mgll Links NCBI RGD Ensembl Show fit	monoglyceride lipase
chr16_-_2226121 Show fit	0.10	ENSRNOT00000091513	Slmap Links NCBI RGD Ensembl Show fit	sarcolemma associated protein
chr6_+_73358112 Show fit	0.10	ENSRNOT00000041373	Arhgap5 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 5
chr1_+_66898946 Show fit	0.10	ENSRNOT00000074063	Zfp551 Links NCBI RGD Ensembl Show fit	zinc finger protein 551
chr3_-_175479034 Show fit	0.10	ENSRNOT00000086761	Hrh3 Links NCBI RGD Ensembl Show fit	histamine receptor H3
chr5_-_83648044 Show fit	0.10	ENSRNOT00000046725	RGD1561195 Links NCBI RGD Ensembl Show fit	similar to ribosomal protein L31
chr8_+_82288705 Show fit	0.10	ENSRNOT00000012409	Bcl2l10 Links NCBI RGD Ensembl Show fit	BCL2 like 10
chr1_+_192233910 Show fit	0.10	ENSRNOT00000016418 ENSRNOT00000016442	Prkcb Links NCBI RGD Ensembl Show fit	protein kinase C, beta
chrX_-_31759161 Show fit	0.10	ENSRNOT00000041515	Asb9 Links NCBI RGD Ensembl Show fit	ankyrin repeat and SOCS box-containing 9
chr4_+_102147211 Show fit	0.10	ENSRNOT00000083239	AABR07060980.1 Links NCBI RGD Ensembl Show fit
chr12_-_48316722 Show fit	0.10	ENSRNOT00000086231	Usp30 Links NCBI RGD Ensembl Show fit	ubiquitin specific peptidase 30
chr8_+_119137728 Show fit	0.10	ENSRNOT00000078170	Prss50 Links NCBI RGD Ensembl Show fit	protease, serine, 50
chr3_-_51643140 Show fit	0.09	ENSRNOT00000006646	Scn3a Links NCBI RGD Ensembl Show fit	sodium voltage-gated channel alpha subunit 3
chr19_-_38321528 Show fit	0.09	ENSRNOT00000031977	Smpd3 Links NCBI RGD Ensembl Show fit	sphingomyelin phosphodiesterase 3
chr15_-_33656089 Show fit	0.09	ENSRNOT00000024186	Myh7 Links NCBI RGD Ensembl Show fit	myosin heavy chain 7
chr6_-_28663233 Show fit	0.09	ENSRNOT00000070979	Cenpo Links NCBI RGD Ensembl Show fit	centromere protein O
chr2_+_95077577 Show fit	0.09	ENSRNOT00000046368	Mrps28 Links NCBI RGD Ensembl Show fit	mitochondrial ribosomal protein S28
chr16_-_49820235 Show fit	0.09	ENSRNOT00000029628	Sorbs2 Links NCBI RGD Ensembl Show fit	sorbin and SH3 domain containing 2
chr5_-_147412705 Show fit	0.09	ENSRNOT00000010688	RGD1561149 Links NCBI RGD Ensembl Show fit	similar to mKIAA1522 protein
chr4_+_70828894 Show fit	0.09	ENSRNOT00000064892	Trbc2 Links NCBI RGD Ensembl Show fit	T cell receptor beta, constant 2
chr3_+_108544931 Show fit	0.09	ENSRNOT00000006809	Tmco5a Links NCBI RGD Ensembl Show fit	transmembrane and coiled-coil domains 5A
chr16_-_69280109 Show fit	0.09	ENSRNOT00000058595	AABR07026240.1 Links NCBI RGD Ensembl Show fit
chr11_+_84094520 Show fit	0.09	ENSRNOT00000046642	Rps15al2 Links NCBI RGD Ensembl Show fit	ribosomal protein S15A-like 2
chr6_+_112203679 Show fit	0.09	ENSRNOT00000031205	Nrxn3 Links NCBI RGD Ensembl Show fit	neurexin 3
chr9_-_15628881 Show fit	0.09	ENSRNOT00000077318 ENSRNOT00000020950	Guca1b Links NCBI RGD Ensembl Show fit	guanylate cyclase activator 1B
chr10_-_110585376 Show fit	0.09	ENSRNOT00000054917	Rab40b Links NCBI RGD Ensembl Show fit	Rab40b, member RAS oncogene family
chr10_-_87541851 Show fit	0.09	ENSRNOT00000089610	RGD1561684 Links NCBI RGD Ensembl Show fit	similar to keratin associated protein 2-4
chr15_+_67555835 Show fit	0.09	ENSRNOT00000045882	Pcdh17 Links NCBI RGD Ensembl Show fit	protocadherin 17
chr1_-_88989552 Show fit	0.08	ENSRNOT00000034001	Arhgap33 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 33
chr9_+_94178221 Show fit	0.08	ENSRNOT00000033487	Alppl2 Links NCBI RGD Ensembl Show fit	alkaline phosphatase, placental-like 2
chr16_+_22361998 Show fit	0.08	ENSRNOT00000016193	Slc18a1 Links NCBI RGD Ensembl Show fit	solute carrier family 18 member A1
chr2_-_79078258 Show fit	0.08	ENSRNOT00000031170	Fbxl7 Links NCBI RGD Ensembl Show fit	F-box and leucine-rich repeat protein 7
chr1_+_162320730 Show fit	0.08	ENSRNOT00000035743	Kctd21 Links NCBI RGD Ensembl Show fit	potassium channel tetramerization domain containing 21
chr15_+_102164751 Show fit	0.08	ENSRNOT00000076400	Gpc6 Links NCBI RGD Ensembl Show fit	glypican 6
chr20_+_2057878 Show fit	0.08	ENSRNOT00000051480	RT1-M6-1 Links NCBI RGD Ensembl Show fit	RT1 class I, locus M6, gene 1
chr19_+_55246926 Show fit	0.08	ENSRNOT00000017358	Il17c Links NCBI RGD Ensembl Show fit	interleukin 17C
chr10_-_78690857 Show fit	0.08	ENSRNOT00000089255	LOC303448 Links NCBI RGD Ensembl Show fit	similar to glyceraldehyde-3-phosphate dehydrogenase
chr13_-_82005741 Show fit	0.08	ENSRNOT00000076404	Mettl11b Links NCBI RGD Ensembl Show fit	methyltransferase like 11B
chr9_+_49837868 Show fit	0.08	ENSRNOT00000021999	Gpr45 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 45
chr3_+_114918648 Show fit	0.08	ENSRNOT00000089204	Sqrdl Links NCBI RGD Ensembl Show fit	sulfide quinone reductase-like (yeast)
chr17_-_21739408 Show fit	0.08	ENSRNOT00000060335	Gcnt2 Links NCBI RGD Ensembl Show fit	glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
chrM_+_11736 Show fit	0.08	ENSRNOT00000048767	Mt-nd5 Links NCBI RGD Ensembl Show fit	mitochondrially encoded NADH dehydrogenase 5
chr6_+_48708368 Show fit	0.08	ENSRNOT00000005905	Myt1l Links NCBI RGD Ensembl Show fit	myelin transcription factor 1-like
chr20_+_44060731 Show fit	0.08	ENSRNOT00000000737	Lama4 Links NCBI RGD Ensembl Show fit	laminin subunit alpha 4
chr2_-_256154584 Show fit	0.08	ENSRNOT00000072487	AABR07013776.1 Links NCBI RGD Ensembl Show fit
chr7_-_73216251 Show fit	0.08	ENSRNOT00000057587	LOC100362027 Links NCBI RGD Ensembl Show fit	ribosomal protein L30-like
chr8_+_116730641 Show fit	0.08	ENSRNOT00000052289	Traip Links NCBI RGD Ensembl Show fit	TRAF-interacting protein
chr16_+_69003868 Show fit	0.08	ENSRNOT00000016907	Adrb3 Links NCBI RGD Ensembl Show fit	adrenoceptor beta 3
chr9_-_9675110 Show fit	0.08	ENSRNOT00000073294	Vav1 Links NCBI RGD Ensembl Show fit	vav guanine nucleotide exchange factor 1
chr13_+_103396314 Show fit	0.08	ENSRNOT00000049499	Slc30a10 Links NCBI RGD Ensembl Show fit	solute carrier family 30, member 10
chr10_+_90550147 Show fit	0.08	ENSRNOT00000032944	Fzd2 Links NCBI RGD Ensembl Show fit	frizzled class receptor 2
chr1_-_101360971 Show fit	0.07	ENSRNOT00000028164	Lin7b Links NCBI RGD Ensembl Show fit	lin-7 homolog B, crumbs cell polarity complex component
chr2_+_195719543 Show fit	0.07	ENSRNOT00000028324	Celf3 Links NCBI RGD Ensembl Show fit	CUGBP, Elav-like family member 3
chr19_-_25062934 Show fit	0.07	ENSRNOT00000060117	Gm10644 Links NCBI RGD Ensembl Show fit	predicted gene 10644
chr1_-_151106802 Show fit	0.07	ENSRNOT00000021971	Tyr Links NCBI RGD Ensembl Show fit	tyrosinase
chr11_+_83884048 Show fit	0.07	ENSRNOT00000002376	LOC108348101 Links NCBI RGD Ensembl Show fit	chloride channel protein 2
chr8_+_39960542 Show fit	0.07	ENSRNOT00000013370	Msantd2 Links NCBI RGD Ensembl Show fit	Myb/SANT-like DNA-binding domain containing 2
chrX_+_77885586 Show fit	0.07	ENSRNOT00000034329	RGD1560821 Links NCBI RGD Ensembl Show fit	similar to small nuclear ribonucleoparticle-associated protein
chr9_-_70787913 Show fit	0.07	ENSRNOT00000072007 ENSRNOT00000017901	Klf7 Links NCBI RGD Ensembl Show fit Klf7 Links NCBI RGD Ensembl Show fit	Kruppel like factor 7 Kruppel like factor 7
chr13_+_107580629 Show fit	0.07	ENSRNOT00000003557	LOC100361993 Links NCBI RGD Ensembl Show fit	transmembrane protein 14C
chr6_-_71349249 Show fit	0.07	ENSRNOT00000068077	Prkd1 Links NCBI RGD Ensembl Show fit	protein kinase D1
chr3_-_158328881 Show fit	0.07	ENSRNOT00000044466	Ptprt Links NCBI RGD Ensembl Show fit	protein tyrosine phosphatase, receptor type, T
chr13_+_99663150 Show fit	0.07	ENSRNOT00000036705	Cnih3 Links NCBI RGD Ensembl Show fit	cornichon family AMPA receptor auxiliary protein 3
chr10_-_88163712 Show fit	0.07	ENSRNOT00000005382 ENSRNOT00000084493	Krt17 Links NCBI RGD Ensembl Show fit	keratin 17
chr10_-_102289837 Show fit	0.07	ENSRNOT00000044922	AABR07030729.1 Links NCBI RGD Ensembl Show fit
chr13_-_1946508 Show fit	0.07	ENSRNOT00000043890	Dsel Links NCBI RGD Ensembl Show fit	dermatan sulfate epimerase-like
chr13_-_82006005 Show fit	0.07	ENSRNOT00000039581	Mettl11b Links NCBI RGD Ensembl Show fit	methyltransferase like 11B
chr20_+_3178250 Show fit	0.07	ENSRNOT00000082116	RT1-S3 Links NCBI RGD Ensembl Show fit	RT1 class Ib, locus S3
chr11_+_82862695 Show fit	0.07	ENSRNOT00000071707 ENSRNOT00000073435	Clcn2 Links NCBI RGD Ensembl Show fit	chloride voltage-gated channel 2
chr10_-_90410569 Show fit	0.07	ENSRNOT00000036112	Itga2b Links NCBI RGD Ensembl Show fit	integrin subunit alpha 2b
chr1_-_219388009 Show fit	0.07	ENSRNOT00000001550	Cabp4 Links NCBI RGD Ensembl Show fit	calcium binding protein 4
chr6_-_76079283 Show fit	0.07	ENSRNOT00000082198	Ppp2r3c Links NCBI RGD Ensembl Show fit	protein phosphatase 2, regulatory subunit B'', gamma
chr7_-_145338152 Show fit	0.07	ENSRNOT00000055268	Spt1 Links NCBI RGD Ensembl Show fit	salivary protein 1
chr3_-_16537433 Show fit	0.07	ENSRNOT00000048523	AABR07051533.2 Links NCBI RGD Ensembl Show fit
chr13_-_89661150 Show fit	0.07	ENSRNOT00000058390	Usp21 Links NCBI RGD Ensembl Show fit	ubiquitin specific peptidase 21
chr20_-_46305157 Show fit	0.07	ENSRNOT00000000340	Ccdc162 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 162
chr2_+_113984646 Show fit	0.07	ENSRNOT00000016799	Tnik Links NCBI RGD Ensembl Show fit	TRAF2 and NCK interacting kinase
chr1_+_219250265 Show fit	0.07	ENSRNOT00000024353	Doc2g Links NCBI RGD Ensembl Show fit	double C2-like domains, gamma
chr7_+_124680294 Show fit	0.07	ENSRNOT00000014720	Mpped1 Links NCBI RGD Ensembl Show fit	metallophosphoesterase domain containing 1
chr18_-_28438654 Show fit	0.07	ENSRNOT00000036301	Mzb1 Links NCBI RGD Ensembl Show fit	marginal zone B and B1 cell-specific protein
chr18_+_83777665 Show fit	0.07	ENSRNOT00000018682	Cbln2 Links NCBI RGD Ensembl Show fit	cerebellin 2 precursor
chr13_+_89597138 Show fit	0.07	ENSRNOT00000004662	Apoa2 Links NCBI RGD Ensembl Show fit	apolipoprotein A2
chr10_-_63491279 Show fit	0.07	ENSRNOT00000082301	Tusc5 Links NCBI RGD Ensembl Show fit	tumor suppressor candidate 5
chr9_+_94425252 Show fit	0.07	ENSRNOT00000064965 ENSRNOT00000076099	Gigyf2 Links NCBI RGD Ensembl Show fit	GRB10 interacting GYF protein 2
chr3_+_92403582 Show fit	0.07	ENSRNOT00000064282	Pamr1 Links NCBI RGD Ensembl Show fit	peptidase domain containing associated with muscle regeneration 1
chr7_-_84023316 Show fit	0.07	ENSRNOT00000005556	Kcnv1 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel modifier subfamily V member 1
chr2_+_263895241 Show fit	0.06	ENSRNOT00000014126 ENSRNOT00000014034	Ptger3 Links NCBI RGD Ensembl Show fit	prostaglandin E receptor 3
chr5_+_27326762 Show fit	0.06	ENSRNOT00000066191	Runx1t1 Links NCBI RGD Ensembl Show fit	RUNX1 translocation partner 1
chr5_+_140712583 Show fit	0.06	ENSRNOT00000019587	Trit1 Links NCBI RGD Ensembl Show fit	tRNA isopentenyltransferase 1
chr1_+_65851060 Show fit	0.06	ENSRNOT00000036880	Zscan18 Links NCBI RGD Ensembl Show fit	zinc finger and SCAN domain containing 18
chr10_+_34383396 Show fit	0.06	ENSRNOT00000047186	Olr1386 Links NCBI RGD Ensembl Show fit	olfactory receptor 1386
chr9_+_94279155 Show fit	0.06	ENSRNOT00000065805	Prss56 Links NCBI RGD Ensembl Show fit	protease, serine, 56
chr1_-_188097530 Show fit	0.06	ENSRNOT00000078825	Syt17 Links NCBI RGD Ensembl Show fit	synaptotagmin 17
chr1_-_165997751 Show fit	0.06	ENSRNOT00000050227	P2ry6 Links NCBI RGD Ensembl Show fit	pyrimidinergic receptor P2Y6
chr12_+_24148567 Show fit	0.06	ENSRNOT00000077378 ENSRNOT00000045157	Ccl24 Links NCBI RGD Ensembl Show fit	C-C motif chemokine ligand 24
chrX_+_10430847 Show fit	0.06	ENSRNOT00000047936	Rpl21 Links NCBI RGD Ensembl Show fit	ribosomal protein L21
chr18_-_68983619 Show fit	0.06	ENSRNOT00000014670	LOC361346 Links NCBI RGD Ensembl Show fit	similar to chromosome 18 open reading frame 54
chr13_-_92988137 Show fit	0.06	ENSRNOT00000004803	Grem2 Links NCBI RGD Ensembl Show fit	gremlin 2, DAN family BMP antagonist
chr5_-_58097577 Show fit	0.06	ENSRNOT00000082496	Rpp25l Links NCBI RGD Ensembl Show fit	ribonuclease P/MRP 25 subunit-like
chr17_+_19249952 Show fit	0.06	ENSRNOT00000023140	Atxn1 Links NCBI RGD Ensembl Show fit	ataxin 1
chr2_-_147819335 Show fit	0.06	ENSRNOT00000057909	Ankub1 Links NCBI RGD Ensembl Show fit	ankyrin repeat and ubiquitin domain containing 1
chr2_+_251200686 Show fit	0.06	ENSRNOT00000019210	Col24a1 Links NCBI RGD Ensembl Show fit	collagen type XXIV alpha 1 chain
chr4_+_29978739 Show fit	0.06	ENSRNOT00000011756	Ppp1r9a Links NCBI RGD Ensembl Show fit	protein phosphatase 1, regulatory subunit 9A
chr8_-_118378460 Show fit	0.06	ENSRNOT00000047247	RGD1563705 Links NCBI RGD Ensembl Show fit	similar to ribosomal protein S23
chr3_-_60611924 Show fit	0.06	ENSRNOT00000068745	Chn1 Links NCBI RGD Ensembl Show fit	chimerin 1
chr17_+_45467015 Show fit	0.06	ENSRNOT00000081408	Gpx5 Links NCBI RGD Ensembl Show fit	glutathione peroxidase 5
chr12_-_6078411 Show fit	0.06	ENSRNOT00000001197	Rxfp2 Links NCBI RGD Ensembl Show fit	relaxin/insulin-like family peptide receptor 2
chr7_+_59462456 Show fit	0.06	ENSRNOT00000083834	AC136025.1 Links NCBI RGD Ensembl Show fit
chr10_+_34578356 Show fit	0.06	ENSRNOT00000047454	Olr1389 Links NCBI RGD Ensembl Show fit	olfactory receptor 1389
chr20_+_27592379 Show fit	0.06	ENSRNOT00000047000	Trappc3l Links NCBI RGD Ensembl Show fit	trafficking protein particle complex 3-like
chr11_-_43099412 Show fit	0.06	ENSRNOT00000002281	Gabrr3 Links NCBI RGD Ensembl Show fit	gamma-aminobutyric acid type A receptor rho3 subunit
chr8_-_69466618 Show fit	0.06	ENSRNOT00000042925	Ids Links NCBI RGD Ensembl Show fit	iduronate 2-sulfatase
chr10_+_38788992 Show fit	0.06	ENSRNOT00000009727	Gdf9 Links NCBI RGD Ensembl Show fit	growth differentiation factor 9
chr14_-_84355528 Show fit	0.06	ENSRNOT00000006542	Sec14l2 Links NCBI RGD Ensembl Show fit	SEC14-like lipid binding 2
chr9_-_13877130 Show fit	0.06	ENSRNOT00000015705	Lrfn2 Links NCBI RGD Ensembl Show fit	leucine rich repeat and fibronectin type III domain containing 2
chr17_+_49417067 Show fit	0.06	ENSRNOT00000090024	Pou6f2 Links NCBI RGD Ensembl Show fit	POU domain, class 6, transcription factor 2
chr15_+_48674380 Show fit	0.06	ENSRNOT00000018762	Fbxo16 Links NCBI RGD Ensembl Show fit	F-box protein 16
chr11_+_70967223 Show fit	0.06	ENSRNOT00000087633	Iqcg Links NCBI RGD Ensembl Show fit	IQ motif containing G
chr1_-_197858016 Show fit	0.06	ENSRNOT00000074778	Atp2a1 Links NCBI RGD Ensembl Show fit	ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1
chr13_-_42263024 Show fit	0.06	ENSRNOT00000004741	Lypd1 Links NCBI RGD Ensembl Show fit	Ly6/Plaur domain containing 1
chr7_-_35550247 Show fit	0.06	ENSRNOT00000049211	Rpl31l3 Links NCBI RGD Ensembl Show fit	ribosomal protein L31-like 3
chr3_+_132052612 Show fit	0.06	ENSRNOT00000030148	AABR07053879.1 Links NCBI RGD Ensembl Show fit
chr16_-_32868680 Show fit	0.06	ENSRNOT00000015974 ENSRNOT00000082392	Aadat Links NCBI RGD Ensembl Show fit	aminoadipate aminotransferase
chr10_-_38969501 Show fit	0.06	ENSRNOT00000090691 ENSRNOT00000081309 ENSRNOT00000010029	Il4 Links NCBI RGD Ensembl Show fit	interleukin 4
chr19_+_60017746 Show fit	0.06	ENSRNOT00000042623	Pard3 Links NCBI RGD Ensembl Show fit	par-3 family cell polarity regulator
chr6_-_115513354 Show fit	0.06	ENSRNOT00000005881	Ston2 Links NCBI RGD Ensembl Show fit	stonin 2
chr16_+_26739389 Show fit	0.06	ENSRNOT00000047223	Klhl2 Links NCBI RGD Ensembl Show fit	kelch-like family member 2
chr11_-_67618704 Show fit	0.06	ENSRNOT00000042208	Ccdc58 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 58
chr1_-_52894832 Show fit	0.06	ENSRNOT00000016471	T Links NCBI RGD Ensembl Show fit	T brachyury transcription factor
chr18_-_31430973 Show fit	0.06	ENSRNOT00000026065	Pcdh12 Links NCBI RGD Ensembl Show fit	protocadherin 12
chr18_+_59830363 Show fit	0.06	ENSRNOT00000082650 ENSRNOT00000078378	Onecut2 Links NCBI RGD Ensembl Show fit	one cut domain, family member 2
chr2_+_188844073 Show fit	0.06	ENSRNOT00000028117	Kcnn3 Links NCBI RGD Ensembl Show fit	potassium calcium-activated channel subfamily N member 3
chr8_-_43480777 Show fit	0.06	ENSRNOT00000060074	LOC688473 Links NCBI RGD Ensembl Show fit	similar to 40S ribosomal protein S2
chr5_-_77173502 Show fit	0.06	ENSRNOT00000023588	Slc46a2 Links NCBI RGD Ensembl Show fit	solute carrier family 46, member 2
chr7_+_71004417 Show fit	0.06	ENSRNOT00000005575	Myo1a Links NCBI RGD Ensembl Show fit	myosin IA
chr13_-_86671515 Show fit	0.06	ENSRNOT00000082869	AABR07021704.1 Links NCBI RGD Ensembl Show fit

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.3	GO:0031444	slow-twitch skeletal muscle fiber contraction(GO:0031444)
0.1	0.2	GO:0006480	N-terminal protein amino acid methylation(GO:0006480)
0.0	0.3	GO:0014827	intestine smooth muscle contraction(GO:0014827)
0.0	0.1	GO:0071492	cellular response to UV-A(GO:0071492)
0.0	0.1	GO:0032639	antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway(GO:0002488) antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent(GO:0002489) TRAIL production(GO:0032639) regulation of TRAIL production(GO:0032679) positive regulation of TRAIL production(GO:0032759)
0.0	0.1	GO:0046340	diacylglycerol catabolic process(GO:0046340)
0.0	0.1	GO:0035408	histone H3-T6 phosphorylation(GO:0035408)
0.0	0.2	GO:0036438	maintenance of lens transparency(GO:0036438)
0.0	0.1	GO:0046013	regulation of T cell homeostatic proliferation(GO:0046013)
0.0	0.2	GO:0010808	positive regulation of synaptic vesicle priming(GO:0010808)
0.0	0.1	GO:0071579	regulation of zinc ion transport(GO:0071579)
0.0	0.1	GO:0002025	vasodilation by norepinephrine-epinephrine involved in regulation of systemic arterial blood pressure(GO:0002025)
0.0	0.1	GO:0007199	G-protein coupled receptor signaling pathway coupled to cGMP nucleotide second messenger(GO:0007199)
0.0	0.1	GO:2000124	regulation of endocannabinoid signaling pathway(GO:2000124)
0.0	0.1	GO:0044313	protein K6-linked deubiquitination(GO:0044313)
0.0	0.1	GO:0038171	cannabinoid signaling pathway(GO:0038171)
0.0	0.1	GO:2000418	positive regulation of eosinophil migration(GO:2000418)
0.0	0.2	GO:0060287	epithelial cilium movement involved in determination of left/right asymmetry(GO:0060287)
0.0	0.1	GO:1905150	regulation of voltage-gated sodium channel activity(GO:1905150)
0.0	0.1	GO:1904170	regulation of bleb assembly(GO:1904170)
0.0	0.1	GO:0014724	regulation of twitch skeletal muscle contraction(GO:0014724) regulation of fast-twitch skeletal muscle fiber contraction(GO:0031446) positive regulation of fast-twitch skeletal muscle fiber contraction(GO:0031448) positive regulation of endoplasmic reticulum calcium ion concentration(GO:0032470)
0.0	0.1	GO:0008594	photoreceptor cell morphogenesis(GO:0008594)
0.0	0.1	GO:0033512	L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512)
0.0	0.1	GO:0089700	protein kinase D signaling(GO:0089700)
0.0	0.1	GO:0070934	CRD-mediated mRNA stabilization(GO:0070934)
0.0	0.1	GO:0097498	endothelial tube lumen extension(GO:0097498)
0.0	0.1	GO:0051612	negative regulation of neurotransmitter uptake(GO:0051581) regulation of serotonin uptake(GO:0051611) negative regulation of serotonin uptake(GO:0051612)
0.0	0.1	GO:0002378	immunoglobulin biosynthetic process(GO:0002378) negative regulation of glucose import in response to insulin stimulus(GO:2001274)
0.0	0.1	GO:0002554	serotonin secretion by platelet(GO:0002554)
0.0	0.1	GO:0014053	negative regulation of gamma-aminobutyric acid secretion(GO:0014053)
0.0	0.1	GO:0018992	germ-line sex determination(GO:0018992)
0.0	0.2	GO:1902260	negative regulation of delayed rectifier potassium channel activity(GO:1902260) negative regulation of voltage-gated potassium channel activity(GO:1903817)
0.0	0.0	GO:0010986	regulation of high-density lipoprotein particle clearance(GO:0010982) positive regulation of lipoprotein particle clearance(GO:0010986)
0.0	0.1	GO:0090154	positive regulation of sphingolipid biosynthetic process(GO:0090154) positive regulation of ceramide biosynthetic process(GO:2000304)
0.0	0.0	GO:0018242	protein O-linked glycosylation via serine(GO:0018242)
0.0	0.1	GO:2000870	regulation of progesterone secretion(GO:2000870)
0.0	0.0	GO:0014846	esophagus smooth muscle contraction(GO:0014846)
0.0	0.1	GO:0030205	dermatan sulfate metabolic process(GO:0030205)
0.0	0.1	GO:0003257	positive regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation(GO:0003257) notochord formation(GO:0014028)
0.0	0.0	GO:0036166	phenotypic switching(GO:0036166)
0.0	0.1	GO:0060689	cell differentiation involved in salivary gland development(GO:0060689)
0.0	0.0	GO:2000587	negative regulation of platelet-derived growth factor receptor-beta signaling pathway(GO:2000587)
0.0	0.2	GO:0035589	G-protein coupled purinergic nucleotide receptor signaling pathway(GO:0035589)
0.0	0.0	GO:1900368	regulation of RNA interference(GO:1900368)
0.0	0.0	GO:0071288	cellular response to mercury ion(GO:0071288)
0.0	0.1	GO:0007256	activation of JNKK activity(GO:0007256)
0.0	0.0	GO:0038110	interleukin-2-mediated signaling pathway(GO:0038110)
0.0	0.0	GO:0034971	histone H3-R17 methylation(GO:0034971)
0.0	0.1	GO:0070560	protein secretion by platelet(GO:0070560)
0.0	0.1	GO:0002759	regulation of antimicrobial humoral response(GO:0002759)
0.0	0.1	GO:1903361	protein localization to basolateral plasma membrane(GO:1903361)
0.0	0.0	GO:0052047	interaction with other organism via secreted substance involved in symbiotic interaction(GO:0052047)
0.0	0.0	GO:0048023	positive regulation of melanin biosynthetic process(GO:0048023) positive regulation of secondary metabolite biosynthetic process(GO:1900378)
0.0	0.0	GO:0050893	sensory processing(GO:0050893)
0.0	0.0	GO:1900222	negative regulation of beta-amyloid clearance(GO:1900222)
0.0	0.1	GO:0035581	sequestering of extracellular ligand from receptor(GO:0035581)
0.0	0.1	GO:0045625	regulation of T-helper 1 cell differentiation(GO:0045625)
0.0	0.0	GO:0046379	extracellular polysaccharide biosynthetic process(GO:0045226) extracellular polysaccharide metabolic process(GO:0046379)
0.0	0.0	GO:0071283	response to high light intensity(GO:0009644) cellular response to iron(III) ion(GO:0071283)
0.0	0.1	GO:0016259	selenocysteine metabolic process(GO:0016259)
0.0	0.0	GO:0030242	pexophagy(GO:0030242)
0.0	0.0	GO:0002188	translation reinitiation(GO:0002188)
0.0	0.0	GO:1902683	regulation of receptor localization to synapse(GO:1902683)
0.0	0.1	GO:0018026	peptidyl-lysine monomethylation(GO:0018026)
0.0	0.0	GO:0003330	regulation of extracellular matrix constituent secretion(GO:0003330) positive regulation of extracellular matrix constituent secretion(GO:0003331)
0.0	0.1	GO:0036065	fucosylation(GO:0036065)
0.0	0.1	GO:0098814	spontaneous neurotransmitter secretion(GO:0061669) spontaneous synaptic transmission(GO:0098814)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0032398	MHC class Ib protein complex(GO:0032398)
0.0	0.1	GO:1990769	proximal neuron projection(GO:1990769)
0.0	0.1	GO:0042584	chromaffin granule membrane(GO:0042584)
0.0	0.1	GO:0070937	CRD-mediated mRNA stability complex(GO:0070937)
0.0	0.1	GO:0031095	platelet dense tubular network membrane(GO:0031095)
0.0	0.2	GO:0032009	early phagosome(GO:0032009)
0.0	0.1	GO:0000137	Golgi cis cisterna(GO:0000137)
0.0	0.1	GO:0002177	manchette(GO:0002177)
0.0	0.1	GO:0005861	troponin complex(GO:0005861)
0.0	0.1	GO:0044326	dendritic spine neck(GO:0044326)
0.0	0.0	GO:0005592	collagen type XI trimer(GO:0005592)
0.0	0.5	GO:0045095	keratin filament(GO:0045095)
0.0	0.0	GO:0072487	MSL complex(GO:0072487)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.2	GO:0071885	N-terminal protein N-methyltransferase activity(GO:0071885)
0.0	0.1	GO:0008107	galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.0	0.2	GO:0008109	N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity(GO:0008109)
0.0	0.1	GO:0035403	histone kinase activity (H3-T6 specific)(GO:0035403)
0.0	0.1	GO:0004949	cannabinoid receptor activity(GO:0004949)
0.0	0.1	GO:0015222	serotonin transmembrane transporter activity(GO:0015222)
0.0	0.1	GO:0004939	beta-adrenergic receptor activity(GO:0004939)
0.0	0.1	GO:0004969	histamine receptor activity(GO:0004969)
0.0	0.1	GO:0047757	chondroitin-glucuronate 5-epimerase activity(GO:0047757)
0.0	0.2	GO:0031014	troponin T binding(GO:0031014)
0.0	0.1	GO:0070653	high-density lipoprotein particle receptor binding(GO:0070653)
0.0	0.1	GO:0030348	syntaxin-3 binding(GO:0030348)
0.0	0.1	GO:0015065	uridine nucleotide receptor activity(GO:0015065) G-protein coupled pyrimidinergic nucleotide receptor activity(GO:0071553)
0.0	0.1	GO:0001565	phorbol ester receptor activity(GO:0001565)
0.0	0.1	GO:0089720	caspase binding(GO:0089720)
0.0	0.1	GO:0016716	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen(GO:0016716)
0.0	0.1	GO:0019767	IgE receptor activity(GO:0019767)
0.0	0.1	GO:0070051	fibrinogen binding(GO:0070051)
0.0	0.1	GO:0030881	beta-2-microglobulin binding(GO:0030881)
0.0	0.0	GO:0030158	protein xylosyltransferase activity(GO:0030158)
0.0	0.1	GO:0019784	NEDD8-specific protease activity(GO:0019784)
0.0	0.1	GO:0004035	alkaline phosphatase activity(GO:0004035)
0.0	0.3	GO:0004993	G-protein coupled serotonin receptor activity(GO:0004993) serotonin receptor activity(GO:0099589)
0.0	0.1	GO:0008273	calcium, potassium:sodium antiporter activity(GO:0008273)
0.0	0.1	GO:0010853	cyclase activator activity(GO:0010853) guanylate cyclase activator activity(GO:0030250)
0.0	0.0	GO:0015292	uniporter activity(GO:0015292)
0.0	0.1	GO:0016212	kynurenine-oxoglutarate transaminase activity(GO:0016212) kynurenine aminotransferase activity(GO:0036137)
0.0	0.1	GO:0005136	interleukin-4 receptor binding(GO:0005136)
0.0	0.1	GO:0030160	GKAP/Homer scaffold activity(GO:0030160)
0.0	0.0	GO:0004852	uroporphyrinogen-III synthase activity(GO:0004852)
0.0	0.1	GO:0004767	sphingomyelin phosphodiesterase activity(GO:0004767)
0.0	0.0	GO:0004911	interleukin-2 receptor activity(GO:0004911)
0.0	0.1	GO:0043208	glycosphingolipid binding(GO:0043208)
0.0	0.1	GO:0004619	bisphosphoglycerate mutase activity(GO:0004082) phosphoglycerate mutase activity(GO:0004619) 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity(GO:0046538)
0.0	0.0	GO:0001642	group III metabotropic glutamate receptor activity(GO:0001642)
0.0	0.0	GO:0003945	N-acetyllactosamine synthase activity(GO:0003945)
0.0	0.1	GO:0042289	MHC class II protein binding(GO:0042289)
0.0	0.1	GO:0034046	poly(G) binding(GO:0034046)
0.0	0.1	GO:0001608	G-protein coupled nucleotide receptor activity(GO:0001608) G-protein coupled purinergic nucleotide receptor activity(GO:0045028)
0.0	0.0	GO:0008449	N-acetylglucosamine-6-sulfatase activity(GO:0008449)
0.0	0.1	GO:0004931	extracellular ATP-gated cation channel activity(GO:0004931) ATP-gated ion channel activity(GO:0035381)
0.0	0.0	GO:0001011	transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting(GO:0001011) transcription factor activity, TFIIB-class binding(GO:0001087)
0.0	0.0	GO:0003726	double-stranded RNA adenosine deaminase activity(GO:0003726)
0.0	0.2	GO:0005247	voltage-gated chloride channel activity(GO:0005247)
0.0	0.3	GO:0008157	protein phosphatase 1 binding(GO:0008157)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	REACTOME SEROTONIN RECEPTORS	Genes involved in Serotonin receptors
0.0	0.2	REACTOME P2Y RECEPTORS	Genes involved in P2Y receptors
0.0	0.2	REACTOME GLUTAMATE NEUROTRANSMITTER RELEASE CYCLE	Genes involved in Glutamate Neurotransmitter Release Cycle
0.0	0.1	REACTOME CS DS DEGRADATION	Genes involved in CS/DS degradation