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GSE49485: Hypoxia transcriptome sequencing of rat brain.

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Results for Foxq1

Z-value: 0.66

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Transcription factors associated with Foxq1

Gene Symbol Gene ID Gene Info
ENSRNOG00000021752 Foxq1

Activity profile of Foxq1 motif

Sorted Z-values of Foxq1 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr7_+_28654733 2.05 ENSRNOT00000006174
pro-melanin-concentrating hormone
chr20_+_5094468 1.03 ENSRNOT00000078576
abhydrolase domain containing 16A
chr5_+_50381244 0.66 ENSRNOT00000012385
glycoprotein hormones, alpha polypeptide
chr1_-_124803363 0.25 ENSRNOT00000066380
Kruppel-like factor 13
chr17_-_13393243 0.22 ENSRNOT00000018252
growth arrest and DNA-damage-inducible, gamma
chr2_+_127525285 0.15 ENSRNOT00000093247
inturned planar cell polarity protein
chr2_-_256154584 0.13 ENSRNOT00000072487

chr7_-_138707221 0.12 ENSRNOT00000009199
adhesion molecule with Ig like domain 2
chr1_-_91588609 0.11 ENSRNOT00000050931
small nuclear ribonucleoprotein polypeptide G
chr7_-_144272578 0.10 ENSRNOT00000020676
ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)
chr3_+_134440195 0.10 ENSRNOT00000072928

chr16_-_48437223 0.09 ENSRNOT00000013005
ENSRNOT00000059401
ectonucleotide pyrophosphatase/phosphodiesterase 6
chr14_-_6900733 0.08 ENSRNOT00000061224
dentin matrix acidic phosphoprotein 1
chr1_+_164380577 0.07 ENSRNOT00000055321
glycerophosphodiester phosphodiesterase domain containing 5
chr15_-_61873406 0.07 ENSRNOT00000045115
LRRGT00053-like
chr8_+_54993859 0.07 ENSRNOT00000013093
interleukin 18
chr16_-_68700296 0.07 ENSRNOT00000060162

chr15_-_95514259 0.07 ENSRNOT00000038433
SLIT and NTRK-like family, member 6
chr11_-_32550539 0.06 ENSRNOT00000002715
regulator of calcineurin 1
chr2_+_211320420 0.06 ENSRNOT00000027504
similar to CG5435-PA
chr1_-_156327352 0.06 ENSRNOT00000074282
coiled-coil domain-containing protein 89-like
chr13_-_72789841 0.06 ENSRNOT00000004694
major histocompatibility complex, class I-related
chr3_-_72219246 0.06 ENSRNOT00000009903
smoothelin-like 1
chr10_-_66873948 0.06 ENSRNOT00000039261
ecotropic viral integration site 2A
chr20_+_29655226 0.06 ENSRNOT00000089059
SPARC/osteonectin, cwcv and kazal like domains proteoglycan 2
chr4_+_66670618 0.06 ENSRNOT00000010796
thromboxane A synthase 1
chrX_-_77559348 0.06 ENSRNOT00000047823
fibronectin type III domain containing 3C1
chr11_-_28527890 0.06 ENSRNOT00000002138
claudin 8
chr1_+_42121636 0.06 ENSRNOT00000025616
myc target 1
chr3_-_2845593 0.06 ENSRNOT00000067479
transmembrane protein 141
chr12_-_19254527 0.05 ENSRNOT00000089349

chrX_+_83678339 0.05 ENSRNOT00000005997
apolipoprotein O-like
chr15_+_4882947 0.05 ENSRNOT00000049255
ENSRNOT00000092002
similar to Hypothetical protein CGI-99
chr16_-_8350067 0.05 ENSRNOT00000026932
mitochondrial import inner membrane translocase subunit Tim23-like
chr1_+_140601791 0.05 ENSRNOT00000091588
interferon stimulated exonuclease gene 20
chrX_+_35869538 0.04 ENSRNOT00000058947
protein phosphatase with EF-hand domain 1
chr2_+_234375315 0.04 ENSRNOT00000071270
elongation of very long chain fatty acids protein 6-like
chr11_+_86421106 0.04 ENSRNOT00000002599
serine/threonine-protein phosphatase 2A catalytic subunit alpha-like
chr8_+_49621568 0.04 ENSRNOT00000021949
transmembrane protease, serine 13
chr3_+_147511563 0.04 ENSRNOT00000006828
solute carrier family 52 member 3
chr7_+_44009069 0.04 ENSRNOT00000005523
MGAT4 family, member C
chr16_+_6434468 0.04 ENSRNOT00000012906
calsequestrin-1-like
chr13_+_51240911 0.04 ENSRNOT00000005551
adiponectin receptor 1
chr4_-_159287193 0.04 ENSRNOT00000080139
potassium voltage-gated channel subfamily A member 6
chr13_-_49487892 0.04 ENSRNOT00000044972
neurofascin
chr8_+_117347029 0.04 ENSRNOT00000047717
inosine monophosphate dehydrogenase 2
chr17_+_49417067 0.04 ENSRNOT00000090024
POU domain, class 6, transcription factor 2
chr12_+_10636275 0.04 ENSRNOT00000001285
cytochrome P450, family 3, subfamily a, polypeptide 18
chr4_+_71512695 0.04 ENSRNOT00000037220
taste receptor, type 2, member 139
chr2_-_100249811 0.04 ENSRNOT00000086760
hepatocyte nuclear factor 4, gamma
chr10_-_34439470 0.04 ENSRNOT00000072081
butyrophilin-like 9
chr14_+_99529284 0.04 ENSRNOT00000006897
ENSRNOT00000067134
V-set and transmembrane domain containing 2A
chr3_+_147511406 0.03 ENSRNOT00000082438
solute carrier family 52 member 3
chr20_+_27173213 0.03 ENSRNOT00000073617
heterogeneous nuclear ribonucleoprotein H3
chrX_+_14578264 0.03 ENSRNOT00000038994
cytochrome b-245 beta chain
chr14_+_91557601 0.03 ENSRNOT00000038733
hypothetical LOC289778
chrX_+_121612952 0.03 ENSRNOT00000022122

chr5_-_60658521 0.03 ENSRNOT00000092866
ENSRNOT00000093024
ENSRNOT00000016875
translocase of outer mitochondrial membrane 5
F-box protein 10
chr6_-_145777767 0.03 ENSRNOT00000046799
ribosomal protein L32
chr4_-_159399634 0.03 ENSRNOT00000089193
NADH:ubiquinone oxidoreductase subunit A9
chr2_-_172361779 0.03 ENSRNOT00000085876
schwannomin interacting protein 1
chr18_+_30527705 0.03 ENSRNOT00000027168
protocadherin beta 14
chrM_+_5323 0.03 ENSRNOT00000050156
mitochondrially encoded cytochrome c oxidase 1
chr2_-_234296145 0.03 ENSRNOT00000014155
ELOVL fatty acid elongase 6
chr1_-_241460868 0.03 ENSRNOT00000054776
similar to RIKEN cDNA 1700028P14
chr8_-_6034142 0.03 ENSRNOT00000014560
baculoviral IAP repeat-containing 2
chr4_+_168142271 0.03 ENSRNOT00000032229
BCL2 like 14
chr5_-_16747222 0.03 ENSRNOT00000011602
Moloney sarcoma oncogene
chrX_-_104984341 0.02 ENSRNOT00000077996
XK related, X-linked
chr15_-_18632536 0.02 ENSRNOT00000061123
ribonuclease P/MRP 14 subunit
chr2_-_233743866 0.02 ENSRNOT00000087062
glutamyl aminopeptidase
chr8_-_73194837 0.02 ENSRNOT00000024885
ENSRNOT00000081450
ENSRNOT00000064613
talin 2
chr1_+_259958310 0.02 ENSRNOT00000019751
ectonucleoside triphosphate diphosphohydrolase 1
chr17_-_77527894 0.02 ENSRNOT00000032173
BEN domain containing 7
chrX_+_53053609 0.02 ENSRNOT00000058357
dystrophin
chr10_-_91581232 0.02 ENSRNOT00000066453
ENSRNOT00000068686

chr3_-_2832697 0.02 ENSRNOT00000065410
RAB, member RAS oncogene family-like 6
chr15_+_33108671 0.02 ENSRNOT00000015468
LDL receptor related protein 10
chr12_-_30083824 0.02 ENSRNOT00000084968
tyrosylprotein sulfotransferase 1
chr20_-_18060661 0.02 ENSRNOT00000070925

chr8_+_117282390 0.02 ENSRNOT00000074772
ubiquitin specific peptidase 19
chr10_-_87407634 0.02 ENSRNOT00000016657
keratin 23
chr12_+_29921443 0.02 ENSRNOT00000001190
SBDS ribosome assembly guanine nucleotide exchange factor
chr7_+_93975451 0.02 ENSRNOT00000011379
collectin subfamily member 10
chr1_+_244630377 0.01 ENSRNOT00000016740
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr2_-_244370983 0.01 ENSRNOT00000021458
Rap1 GTPase-GDP dissociation stimulator 1
chr9_+_65177511 0.01 ENSRNOT00000048027
aldehyde oxidase 2
chr1_+_154606490 0.01 ENSRNOT00000024095
coiled-coil domain containing 89
chr4_-_9921610 0.01 ENSRNOT00000017018
peptidase, mitochondrial processing beta subunit
chr5_-_169160987 0.01 ENSRNOT00000055487
THAP domain containing 3
chr3_-_112061796 0.01 ENSRNOT00000056258
phospholipase A2 group IVD
chr7_-_66172360 0.01 ENSRNOT00000005537
family with sequence similarity 19 member A2, C-C motif chemokine like
chr4_-_115239723 0.01 ENSRNOT00000042699
actin, gamma 2, smooth muscle, enteric
chr3_-_160038078 0.01 ENSRNOT00000013445
serine incorporator 3
chr4_-_77747070 0.01 ENSRNOT00000009247
zinc finger protein 746
chr6_+_76677213 0.01 ENSRNOT00000076760
breast cancer metastasis-suppressor 1-like
chr4_+_163293724 0.01 ENSRNOT00000077356
GABA type A receptor associated protein like 1
chr12_-_51965779 0.01 ENSRNOT00000056733
replication protein A3-like
chr5_-_102786331 0.01 ENSRNOT00000086635
basonuclin 2
chr4_+_161720501 0.01 ENSRNOT00000008196
ENSRNOT00000055886
nuclear receptor interacting protein 2
chr5_-_136098013 0.01 ENSRNOT00000089166
RGD1563714
chr13_+_82479998 0.01 ENSRNOT00000079872
coagulation factor V
chr8_-_122311431 0.00 ENSRNOT00000033126
F-box and leucine-rich repeat protein 2
chr10_-_14072230 0.00 ENSRNOT00000018405
transducin (beta)-like 3
chr19_+_15081590 0.00 ENSRNOT00000024187
carboxylesterase 1F

Network of associatons between targets according to the STRING database.

First level regulatory network of Foxq1

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 2.0 GO:0032227 negative regulation of synaptic transmission, dopaminergic(GO:0032227)
0.3 1.0 GO:0046462 monoacylglycerol metabolic process(GO:0046462) monoacylglycerol catabolic process(GO:0052651)
0.0 0.7 GO:0046884 thyroid hormone generation(GO:0006590) follicle-stimulating hormone secretion(GO:0046884)
0.0 0.1 GO:0070173 regulation of enamel mineralization(GO:0070173)
0.0 0.1 GO:0032218 riboflavin transport(GO:0032218)
0.0 0.1 GO:0051140 regulation of NK T cell proliferation(GO:0051140) positive regulation of NK T cell proliferation(GO:0051142)
0.0 0.2 GO:0045647 negative regulation of erythrocyte differentiation(GO:0045647)
0.0 0.0 GO:0000738 DNA catabolic process, exonucleolytic(GO:0000738)
0.0 0.2 GO:0000185 activation of MAPKKK activity(GO:0000185)
0.0 0.1 GO:0060005 vestibular reflex(GO:0060005)
0.0 0.0 GO:1904844 response to L-glutamine(GO:1904844) cellular response to L-glutamine(GO:1904845)
0.0 0.1 GO:0010839 negative regulation of keratinocyte proliferation(GO:0010839)
0.0 0.1 GO:0034625 fatty acid elongation, monounsaturated fatty acid(GO:0034625)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0005683 U7 snRNP(GO:0005683)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.0 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.1 2.0 GO:0071855 neuropeptide receptor binding(GO:0071855)
0.0 0.2 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.0 0.1 GO:0032217 riboflavin transporter activity(GO:0032217)
0.0 0.1 GO:0008597 calcium-dependent protein serine/threonine phosphatase regulator activity(GO:0008597)
0.0 0.1 GO:1990446 U1 snRNP binding(GO:1990446)
0.0 0.0 GO:0055100 adiponectin binding(GO:0055100)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.7 REACTOME GLYCOPROTEIN HORMONES Genes involved in Glycoprotein hormones
0.0 2.0 REACTOME PEPTIDE LIGAND BINDING RECEPTORS Genes involved in Peptide ligand-binding receptors
0.0 0.1 REACTOME SLBP DEPENDENT PROCESSING OF REPLICATION DEPENDENT HISTONE PRE MRNAS Genes involved in SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs