GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chrX_+_32495809 Show fit	0.06	ENSRNOT00000020999	RGD1565844 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 1700045I19
chr1_-_124803363 Show fit	0.06	ENSRNOT00000066380	Klf13 Links NCBI RGD Ensembl Show fit	Kruppel-like factor 13
chr9_-_121713091 Show fit	0.06	ENSRNOT00000073432	Adcyap1 Links NCBI RGD Ensembl Show fit	adenylate cyclase activating polypeptide 1
chr8_+_49713190 Show fit	0.05	ENSRNOT00000022074	Fxyd2 Links NCBI RGD Ensembl Show fit	FXYD domain-containing ion transport regulator 2
chr20_-_5037022 Show fit	0.05	ENSRNOT00000091022 ENSRNOT00000060762	Msh5 Links NCBI RGD Ensembl Show fit	mutS homolog 5
chr18_-_16542165 Show fit	0.05	ENSRNOT00000079381	Slc39a6 Links NCBI RGD Ensembl Show fit	solute carrier family 39 member 6
chr4_+_66670618 Show fit	0.04	ENSRNOT00000010796	Tbxas1 Links NCBI RGD Ensembl Show fit	thromboxane A synthase 1
chr13_+_27465930 Show fit	0.04	ENSRNOT00000003314	Serpinb10 Links NCBI RGD Ensembl Show fit	serpin family B member 10
chr4_-_28437676 Show fit	0.03	ENSRNOT00000012995	Hepacam2 Links NCBI RGD Ensembl Show fit	HEPACAM family member 2
chr3_+_65816569 Show fit	0.03	ENSRNOT00000079672	Ube2e3 Links NCBI RGD Ensembl Show fit	ubiquitin-conjugating enzyme E2E 3
chr7_-_29171783 Show fit	0.03	ENSRNOT00000079235	Mybpc1 Links NCBI RGD Ensembl Show fit	myosin binding protein C, slow type
chr12_+_41486076 Show fit	0.03	ENSRNOT00000057242	Rita1 Links NCBI RGD Ensembl Show fit	RBPJ interacting and tubulin associated 1
chr10_+_64174931 Show fit	0.03	ENSRNOT00000035948	RGD1565611 Links NCBI RGD Ensembl Show fit	RGD1565611
chrX_-_71169865 Show fit	0.02	ENSRNOT00000050415	Il2rg Links NCBI RGD Ensembl Show fit	interleukin 2 receptor subunit gamma
chr2_+_188844073 Show fit	0.02	ENSRNOT00000028117	Kcnn3 Links NCBI RGD Ensembl Show fit	potassium calcium-activated channel subfamily N member 3
chr15_-_32888095 Show fit	0.02	ENSRNOT00000012233	Dad1 Links NCBI RGD Ensembl Show fit	defender against cell death 1
chr4_+_176510696 Show fit	0.02	ENSRNOT00000016614	Iapp Links NCBI RGD Ensembl Show fit	islet amyloid polypeptide
chr17_-_34945317 Show fit	0.02	ENSRNOT00000090457	Vma21 Links NCBI RGD Ensembl Show fit	VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
chr11_-_45124423 Show fit	0.02	ENSRNOT00000046383	Filip1l Links NCBI RGD Ensembl Show fit	filamin A interacting protein 1-like
chr20_+_27592379 Show fit	0.02	ENSRNOT00000047000	Trappc3l Links NCBI RGD Ensembl Show fit	trafficking protein particle complex 3-like
chr4_-_29778039 Show fit	0.02	ENSRNOT00000074177	Sgce Links NCBI RGD Ensembl Show fit	sarcoglycan, epsilon
chr19_-_17045349 Show fit	0.02	ENSRNOT00000086829	Fto Links NCBI RGD Ensembl Show fit	FTO, alpha-ketoglutarate dependent dioxygenase
chr10_+_11338306 Show fit	0.02	ENSRNOT00000033695	LOC100910875 Links NCBI RGD Ensembl Show fit	protein FAM100A-like
chr15_-_52320385 Show fit	0.02	ENSRNOT00000067776	Dmtn Links NCBI RGD Ensembl Show fit	dematin actin binding protein
chr5_-_136112344 Show fit	0.02	ENSRNOT00000050195	RGD1563714 Links NCBI RGD Ensembl Show fit	RGD1563714
chr4_-_173640684 Show fit	0.02	ENSRNOT00000010728	Rergl Links NCBI RGD Ensembl Show fit	RERG like
chr4_+_108301129 Show fit	0.02	ENSRNOT00000007993	LRRTM1 Links NCBI RGD Ensembl Show fit	leucine rich repeat transmembrane neuronal 1
chrX_+_104684676 Show fit	0.01	ENSRNOT00000083229	Tnmd Links NCBI RGD Ensembl Show fit	tenomodulin
chr7_+_34326087 Show fit	0.01	ENSRNOT00000006971	Hal Links NCBI RGD Ensembl Show fit	histidine ammonia lyase
chr13_-_91776397 Show fit	0.01	ENSRNOT00000073147	Mptx1 Links NCBI RGD Ensembl Show fit	mucosal pentraxin 1
chr6_-_25507073 Show fit	0.01	ENSRNOT00000061176	Plb1 Links NCBI RGD Ensembl Show fit	phospholipase B1
chr3_+_123031307 Show fit	0.01	ENSRNOT00000080379	Ptpra Links NCBI RGD Ensembl Show fit	protein tyrosine phosphatase, receptor type, A
chr10_+_10889488 Show fit	0.01	ENSRNOT00000071746	Ubald1 Links NCBI RGD Ensembl Show fit	UBA-like domain containing 1
chr13_+_53351717 Show fit	0.01	ENSRNOT00000012038	Kif14 Links NCBI RGD Ensembl Show fit	kinesin family member 14
chr7_+_51794173 Show fit	0.01	ENSRNOT00000043774	Otogl Links NCBI RGD Ensembl Show fit	otogelin-like
chr16_-_37908173 Show fit	0.01	ENSRNOT00000075026	Glra3 Links NCBI RGD Ensembl Show fit	glycine receptor, alpha 3
chr2_+_143475323 Show fit	0.01	ENSRNOT00000044028 ENSRNOT00000015437	Trpc4 Links NCBI RGD Ensembl Show fit	transient receptor potential cation channel, subfamily C, member 4
chr1_-_170431073 Show fit	0.01	ENSRNOT00000024710	Hpx Links NCBI RGD Ensembl Show fit	hemopexin
chr5_-_83648044 Show fit	0.01	ENSRNOT00000046725	RGD1561195 Links NCBI RGD Ensembl Show fit	similar to ribosomal protein L31
chr6_+_136536736 Show fit	0.01	ENSRNOT00000086594	Tdrd9 Links NCBI RGD Ensembl Show fit	tudor domain containing 9
chr1_-_216750844 Show fit	0.01	ENSRNOT00000054862	Nap1l4 Links NCBI RGD Ensembl Show fit	nucleosome assembly protein 1-like 4
chr16_+_50181316 Show fit	0.01	ENSRNOT00000077662	F11 Links NCBI RGD Ensembl Show fit	coagulation factor XI
chr14_+_46001849 Show fit	0.00	ENSRNOT00000076611	Rell1 Links NCBI RGD Ensembl Show fit	RELT-like 1
chr3_-_163847671 Show fit	0.00	ENSRNOT00000076833	Znfx1 Links NCBI RGD Ensembl Show fit	zinc finger, NFX1-type containing 1
chr4_-_85915099 Show fit	0.00	ENSRNOT00000016182	Neurod6 Links NCBI RGD Ensembl Show fit	neuronal differentiation 6
chr8_-_127900463 Show fit	0.00	ENSRNOT00000078303	Slc22a13 Links NCBI RGD Ensembl Show fit	solute carrier family 22 member 13
chr5_-_128333805 Show fit	0.00	ENSRNOT00000037523	Zfyve9 Links NCBI RGD Ensembl Show fit	zinc finger FYVE-type containing 9

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0002877	regulation of acute inflammatory response to non-antigenic stimulus(GO:0002877)