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GSE49485: Hypoxia transcriptome sequencing of rat brain.
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Results for Fli1
Z-value: 0.73
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Transcription factors associated with Fli1
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| Fli1 | rn6_v1_chr8_-_33661049_33661049 | 0.47 | 4.2e-01 | Click! |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr8_-_14292698 Show fit | 0.91 |
ENSRNOT00000073672
|
|
|
| chr1_-_20155960 Show fit | 0.77 |
ENSRNOT00000061389
|
sterile alpha motif domain containing 3 |
|
| chr5_+_159534202 Show fit | 0.46 |
ENSRNOT00000010993
|
microfibrillar-associated protein 2 |
|
| chr2_+_154604832 Show fit | 0.45 |
ENSRNOT00000013777
|
vomeronasal 2 receptor 44 |
|
| chrX_-_123788898 Show fit | 0.44 |
ENSRNOT00000009123
|
A-kinase anchoring protein 14 |
|
| chr1_+_150797084 Show fit | 0.41 |
ENSRNOT00000018990
|
NADPH oxidase 4 |
|
| chr12_-_23841049 Show fit | 0.40 |
ENSRNOT00000031555
|
heat shock protein family B (small) member 1 |
|
| chr5_-_78393143 Show fit | 0.40 |
ENSRNOT00000043610
|
60S ribosomal protein L31-like |
|
| chr3_+_171597241 Show fit | 0.39 |
ENSRNOT00000029558
|
similar to Protein C20orf85 homolog |
|
| chr9_-_17212628 Show fit | 0.38 |
ENSRNOT00000002656
ENSRNOT00000007876 |
similar to 40S ribosomal protein S2 |
Network of associatons between targets according to the STRING database.
First level regulatory network of Fli1
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.5 | GO:0048050 | post-embryonic eye morphogenesis(GO:0048050) |
| 0.1 | 0.4 | GO:1903544 | cellular response to interleukin-11(GO:0071348) response to butyrate(GO:1903544) |
| 0.0 | 0.4 | GO:0032099 | negative regulation of appetite(GO:0032099) |
| 0.0 | 0.4 | GO:0050667 | homocysteine metabolic process(GO:0050667) |
| 0.1 | 0.3 | GO:0018199 | peptidyl-glutamine modification(GO:0018199) |
| 0.1 | 0.3 | GO:0017196 | N-terminal peptidyl-methionine acetylation(GO:0017196) |
| 0.0 | 0.2 | GO:0045903 | positive regulation of translational fidelity(GO:0045903) |
| 0.0 | 0.2 | GO:0003166 | bundle of His development(GO:0003166) |
| 0.0 | 0.2 | GO:0070318 | positive regulation of G0 to G1 transition(GO:0070318) |
| 0.0 | 0.2 | GO:0034379 | very-low-density lipoprotein particle assembly(GO:0034379) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.5 | GO:0043205 | microfibril(GO:0001527) fibril(GO:0043205) |
| 0.0 | 0.5 | GO:0035686 | sperm fibrous sheath(GO:0035686) |
| 0.1 | 0.4 | GO:0097512 | cardiac myofibril(GO:0097512) |
| 0.0 | 0.4 | GO:0043020 | NADPH oxidase complex(GO:0043020) |
| 0.0 | 0.3 | GO:0031414 | N-terminal protein acetyltransferase complex(GO:0031414) |
| 0.0 | 0.3 | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain(GO:0033178) |
| 0.0 | 0.1 | GO:0032584 | growth cone membrane(GO:0032584) |
| 0.0 | 0.1 | GO:0061700 | GATOR2 complex(GO:0061700) |
| 0.0 | 0.1 | GO:0072669 | tRNA-splicing ligase complex(GO:0072669) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.5 | GO:0070051 | fibrinogen binding(GO:0070051) |
| 0.0 | 0.5 | GO:0030291 | protein serine/threonine kinase inhibitor activity(GO:0030291) |
| 0.0 | 0.4 | GO:0016174 | NAD(P)H oxidase activity(GO:0016174) |
| 0.0 | 0.4 | GO:0016503 | pheromone receptor activity(GO:0016503) |
| 0.0 | 0.3 | GO:0008553 | hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553) |
| 0.0 | 0.3 | GO:0004596 | peptide alpha-N-acetyltransferase activity(GO:0004596) |
| 0.0 | 0.3 | GO:0016755 | transferase activity, transferring amino-acyl groups(GO:0016755) |
| 0.0 | 0.2 | GO:1990932 | 5.8S rRNA binding(GO:1990932) |
| 0.0 | 0.1 | GO:0008401 | retinoic acid 4-hydroxylase activity(GO:0008401) |
| 0.0 | 0.1 | GO:0031893 | vasopressin receptor binding(GO:0031893) |
Gene overrepresentation in curated gene sets: canonical pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.5 | PID P38 MK2 PATHWAY | p38 signaling mediated by MAPKAP kinases |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.3 | REACTOME INSULIN RECEPTOR RECYCLING | Genes involved in Insulin receptor recycling |
| 0.0 | 0.1 | REACTOME XENOBIOTICS | Genes involved in Xenobiotics |