Project

GSE49485: Hypoxia transcriptome sequencing of rat brain.

Navigation
Downloads

Results for Emx1_Emx2

Z-value: 0.29

Motif logo

Transcription factors associated with Emx1_Emx2

Gene Symbol Gene ID Gene Info
ENSRNOG00000015493 empty spiracles homeobox 1
ENSRNOG00000009482 empty spiracles homeobox 2

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Emx2rn6_v1_chr1_+_280633938_2806339380.904.0e-02Click!
Emx1rn6_v1_chr4_+_116968000_1169680000.563.2e-01Click!

Activity profile of Emx1_Emx2 motif

Sorted Z-values of Emx1_Emx2 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr9_+_73378057 0.11 ENSRNOT00000043627
ENSRNOT00000045766
ENSRNOT00000092445
ENSRNOT00000037974
microtubule-associated protein 2
chr20_+_3176107 0.11 ENSRNOT00000001036
RT1 class Ib, locus S3
chr2_+_86996798 0.09 ENSRNOT00000070821
zinc finger protein 455
chr11_-_11585078 0.09 ENSRNOT00000088878
roundabout guidance receptor 2
chr13_-_76049363 0.08 ENSRNOT00000075865
ENSRNOT00000007455
BMP/retinoic acid inducible neural specific 2
chr2_+_86996497 0.08 ENSRNOT00000042058
zinc finger protein 455
chr17_-_51912496 0.07 ENSRNOT00000019272
inhibin beta A subunit
chr20_+_34258791 0.06 ENSRNOT00000000468
solute carrier family 35, member F1
chr12_-_46493203 0.06 ENSRNOT00000057036
citron rho-interacting serine/threonine kinase
chr9_-_30844199 0.06 ENSRNOT00000017169
collagen type XIX alpha 1 chain
chr1_+_101603222 0.06 ENSRNOT00000033278
izumo sperm-egg fusion 1
chr20_-_13994794 0.05 ENSRNOT00000093466
gamma-glutamyltransferase 5
chr2_+_54466280 0.05 ENSRNOT00000033112
complement C6
chr3_+_161236898 0.05 ENSRNOT00000082303
ENSRNOT00000020323
ubiquitin-conjugating enzyme E2C
chr20_+_3246739 0.05 ENSRNOT00000061299
RT1 class I, locus T24, gene 2
chrX_+_78042859 0.05 ENSRNOT00000003286
lysophosphatidic acid receptor 4
chr3_+_15560712 0.05 ENSRNOT00000010218
prostaglandin-endoperoxide synthase 1
chr7_+_64769089 0.05 ENSRNOT00000088861
glutamate receptor interacting protein 1
chr2_-_198706428 0.05 ENSRNOT00000085006
RNA polymerase III subunit G like
chr11_-_782954 0.05 ENSRNOT00000040065
Eph receptor A3
chr11_+_40509078 0.04 ENSRNOT00000023108

chr6_+_106084815 0.04 ENSRNOT00000058195
signal-induced proliferation-associated 1 like 1
chr13_-_32427177 0.04 ENSRNOT00000044628
cadherin 19
chr8_-_3272306 0.04 ENSRNOT00000040365

chrX_+_84064427 0.04 ENSRNOT00000046364
zinc finger protein 711
chr11_-_768644 0.04 ENSRNOT00000090197
Eph receptor A3
chr13_-_67609469 0.03 ENSRNOT00000059984
ENSRNOT00000059982
similar to cDNA sequence BC003331
chr10_-_91661558 0.03 ENSRNOT00000043156

chr15_+_12827707 0.03 ENSRNOT00000012452
Fez family zinc finger 2
chr5_+_152680407 0.03 ENSRNOT00000076864
stathmin 1
chr1_+_170205591 0.03 ENSRNOT00000071063
similar to olfactory receptor 692
chr1_+_265157379 0.03 ENSRNOT00000022426
beta-transducin repeat containing E3 ubiquitin protein ligase
chr10_-_36402619 0.03 ENSRNOT00000040346
zinc finger protein 2
chr20_+_3230052 0.03 ENSRNOT00000078454
RT1 class I, locus T24, gene 3
chr1_-_189911571 0.03 ENSRNOT00000080996
ENSRNOT00000088536
zona pellucida glycoprotein 2
chr5_+_50381244 0.03 ENSRNOT00000012385
glycoprotein hormones, alpha polypeptide
chr3_+_148327965 0.03 ENSRNOT00000010851
ENSRNOT00000088481
TPX2, microtubule nucleation factor
chr1_+_219403970 0.03 ENSRNOT00000029607
protein tyrosine phosphatase, receptor type, C-associated protein
chr4_+_31229913 0.03 ENSRNOT00000077134
ENSRNOT00000087897
sterile alpha motif domain containing 9-like
chr1_+_189233141 0.03 ENSRNOT00000049380
acyl-CoA synthetase medium-chain family member 5
chr3_-_48831417 0.03 ENSRNOT00000009920
ENSRNOT00000085246
potassium voltage-gated channel subfamily H member 7
chr10_+_1920529 0.03 ENSRNOT00000072296
RIKEN cDNA A630010A05 gene
chr1_+_141218095 0.03 ENSRNOT00000051411
similar to 6.8 kDa mitochondrial proteolipid
chr8_+_117170620 0.03 ENSRNOT00000075271
hypothetical LOC498675
chr2_+_58448917 0.03 ENSRNOT00000082562
RAN binding protein 3-like
chr4_-_55011415 0.03 ENSRNOT00000056996
glutamate metabotropic receptor 8
chr13_-_102857551 0.03 ENSRNOT00000080309
microtubule affinity regulating kinase 1
chr16_+_39827749 0.03 ENSRNOT00000074885
WD repeat domain 17
chr6_-_3254779 0.03 ENSRNOT00000061975
cyclin-dependent kinase-like 4
chr4_+_99823252 0.03 ENSRNOT00000013587
RNA polymerase I subunit A
chr1_-_166912524 0.03 ENSRNOT00000092952
inositol polyphosphate phosphatase-like 1
chr16_-_32439421 0.03 ENSRNOT00000043100
NIMA-related kinase 1
chr16_-_32421005 0.03 ENSRNOT00000082712
NIMA-related kinase 1
chr9_+_111279495 0.02 ENSRNOT00000072791
diphosphoinositol pentakisphosphate kinase 2
chr1_+_22332090 0.02 ENSRNOT00000091252
trace amine-associated receptor 8c (Taar8c), mRNA
chrX_-_14972675 0.02 ENSRNOT00000079664
solute carrier family 38, member 5
chr2_+_52855671 0.02 ENSRNOT00000080851

chr16_+_70644474 0.02 ENSRNOT00000045955
ribosomal protein S28-like
chr8_+_106816152 0.02 ENSRNOT00000047613
Fas apoptotic inhibitory molecule
chr1_+_147713892 0.02 ENSRNOT00000092985
ENSRNOT00000054742
ENSRNOT00000074103
cytochrome P450, family 2, subfamily C, polypeptide 6, variant 1
chr2_-_186245163 0.02 ENSRNOT00000089339
doublecortin-like kinase 2
chr7_+_27620458 0.02 ENSRNOT00000059532
similar to FLJ25323 protein
chr2_-_219262901 0.02 ENSRNOT00000037068
G-protein coupled receptor 88
chr8_+_107229832 0.02 ENSRNOT00000045821
Fas apoptotic inhibitory molecule
chr2_-_118882562 0.02 ENSRNOT00000058860
potassium calcium-activated channel subfamily M regulatory beta subunit 3
chr2_-_57600820 0.02 ENSRNOT00000083247
NIPBL, cohesin loading factor
chr1_-_151106802 0.02 ENSRNOT00000021971
tyrosinase
chr16_+_62153792 0.02 ENSRNOT00000074543
small integral membrane protein 18
chr17_-_18590536 0.02 ENSRNOT00000078992
CAP, adenylate cyclase-associated protein, 2 (yeast)
chr3_-_55951584 0.02 ENSRNOT00000036585
FAST kinase domains 1
chr7_-_50278842 0.02 ENSRNOT00000088950
synaptotagmin 1
chr16_+_46731403 0.02 ENSRNOT00000017624
teneurin transmembrane protein 3
chr2_+_220432037 0.02 ENSRNOT00000021988
ferric-chelate reductase 1
chr1_-_256734719 0.02 ENSRNOT00000021546
ENSRNOT00000089456
myoferlin
chr6_-_23404368 0.02 ENSRNOT00000036374
family with sequence similarity 179, member A
chr12_+_25435567 0.02 ENSRNOT00000092982
general transcription factor II I
chr11_+_77644541 0.02 ENSRNOT00000074688
transmembrane protein 207
chr18_+_1866080 0.02 ENSRNOT00000018646
small nuclear ribonucleoprotein D1
chr7_-_76488216 0.02 ENSRNOT00000080024
neurocalcin delta
chr2_+_232104809 0.02 ENSRNOT00000083193
TRAF-interacting protein with forkhead-associated domain
chr2_+_24668116 0.02 ENSRNOT00000067022
ENSRNOT00000036748
WD repeat domain 41
chrM_+_11736 0.02 ENSRNOT00000048767
mitochondrially encoded NADH dehydrogenase 5
chrX_+_131381134 0.02 ENSRNOT00000007474

chr5_+_145145983 0.02 ENSRNOT00000079732
zinc finger MYM-type containing 6
chr7_-_80457816 0.02 ENSRNOT00000039430

chr13_+_57243877 0.02 ENSRNOT00000083693
potassium sodium-activated channel subfamily T member 2
chr2_+_18392142 0.02 ENSRNOT00000043196
hyaluronan and proteoglycan link protein 1
chr15_+_52265557 0.02 ENSRNOT00000015969
nudix hydrolase 18
chr5_+_33784715 0.02 ENSRNOT00000035685
solute carrier family 7 member 13
chr4_+_35279063 0.02 ENSRNOT00000011833
neurexophilin 1
chr1_+_128637049 0.02 ENSRNOT00000018639
tetratricopeptide repeat domain 23
chr6_+_137323713 0.02 ENSRNOT00000029017
phospholipase D family, member 4
chr9_+_94525925 0.02 ENSRNOT00000075967
GRB10 interacting GYF protein 2
chr15_-_14510828 0.02 ENSRNOT00000039347
sentan, cilia apical structure protein
chr17_-_76281660 0.02 ENSRNOT00000058070
UPF2 regulator of nonsense transcripts homolog (yeast)
chr4_+_31704747 0.02 ENSRNOT00000047850

chr4_+_173732248 0.02 ENSRNOT00000041499
phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 gamma
chr15_-_29548400 0.02 ENSRNOT00000078176

chr3_-_21904133 0.02 ENSRNOT00000090576
ENSRNOT00000087611
ENSRNOT00000066377
spermatid perinuclear RNA binding protein
chr1_-_167911961 0.02 ENSRNOT00000025097
olfactory receptor 59
chr6_-_14523961 0.02 ENSRNOT00000071402
neurexin 1
chr14_-_106248539 0.02 ENSRNOT00000067668
UDP-glucose pyrophosphorylase 2
chr2_-_186245342 0.02 ENSRNOT00000057062
ENSRNOT00000022292
doublecortin-like kinase 2
chr16_-_64806050 0.02 ENSRNOT00000015725
dual specificity phosphatase 26
chr14_+_69800156 0.02 ENSRNOT00000072746
ligand dependent nuclear receptor corepressor-like
chrX_-_139916883 0.02 ENSRNOT00000090442
glypican 3
chr13_+_105684420 0.02 ENSRNOT00000040543
G patch domain containing 2
chr20_-_45126062 0.02 ENSRNOT00000000720
similar to KIAA1919 protein
chr7_+_91384187 0.02 ENSRNOT00000005828
UTP23, small subunit processome component
chr2_-_250923744 0.02 ENSRNOT00000084996
chloride channel accessory 1
chr14_+_108415068 0.02 ENSRNOT00000083763
pseudouridylate synthase 10
chr7_-_143497108 0.02 ENSRNOT00000048613
keratin 76
chr6_+_132551394 0.02 ENSRNOT00000019583
Enah/Vasp-like
chrM_+_7006 0.02 ENSRNOT00000043693
mitochondrially encoded cytochrome c oxidase II
chr8_+_79638696 0.02 ENSRNOT00000085959
dyslexia susceptibility 1 candidate 1
chr11_+_61605937 0.02 ENSRNOT00000093455
ENSRNOT00000093242
GRAM domain containing 1C
chr6_+_91532467 0.02 ENSRNOT00000082500
ENSRNOT00000064668
kelch domain containing 1
chr8_-_126390801 0.02 ENSRNOT00000089732

chr14_+_58877806 0.02 ENSRNOT00000051559
similar to 60S ribosomal protein L23a
chr1_-_101131413 0.02 ENSRNOT00000093729
fms-related tyrosine kinase 3 ligand
chr2_+_88217188 0.02 ENSRNOT00000014267
carbonic anhydrase I
chr13_-_102942863 0.01 ENSRNOT00000003198
microtubule affinity regulating kinase 1
chr6_+_109617596 0.01 ENSRNOT00000085031
ENSRNOT00000089972
ENSRNOT00000082402
feline leukemia virus subgroup C cellular receptor family, member 2
chr13_+_76942928 0.01 ENSRNOT00000040505
ring finger and WD repeat domain 2
chr1_+_156552328 0.01 ENSRNOT00000055401
discs large MAGUK scaffold protein 2
chr13_-_105684374 0.01 ENSRNOT00000073142
spermatogenesis associated 17
chr1_-_183763664 0.01 ENSRNOT00000044231
similar to 6.8 kDa mitochondrial proteolipid
chr1_-_133503194 0.01 ENSRNOT00000077049
multiple C2 and transmembrane domain containing 2
chr10_+_90377103 0.01 ENSRNOT00000040472
granulin precursor
chr12_+_41486076 0.01 ENSRNOT00000057242
RBPJ interacting and tubulin associated 1
chr1_+_21613148 0.01 ENSRNOT00000018695
ectonucleotide pyrophosphatase/phosphodiesterase 3
chr1_-_246010594 0.01 ENSRNOT00000023762
regulatory factor X3
chr4_+_88423412 0.01 ENSRNOT00000040163
vomeronasal 1 receptor 88
chr3_-_150156839 0.01 ENSRNOT00000036217
elongation factor 1-alpha 1 pseudogene
chr18_+_70739492 0.01 ENSRNOT00000085601
acetyl-CoA acyltransferase 2
chr1_+_81499821 0.01 ENSRNOT00000027100
Ly6/Plaur domain containing 3
chr6_+_129609375 0.01 ENSRNOT00000083732
poly (A) polymerase alpha
chr1_-_78180216 0.01 ENSRNOT00000071576
complement component 5a receptor 2
chr10_+_90376933 0.01 ENSRNOT00000028557
granulin precursor
chr10_+_45307007 0.01 ENSRNOT00000003885
tripartite motif-containing 17
chr1_-_252461461 0.01 ENSRNOT00000026093
ankyrin repeat domain 22
chr2_+_55747318 0.01 ENSRNOT00000050655
DAB2, clathrin adaptor protein
chr16_+_2537248 0.01 ENSRNOT00000017995
ankyrin repeat and SOCS box-containing 14
chrX_+_9956370 0.01 ENSRNOT00000082316
peripheral plasma membrane protein CASK-like
chr5_-_162602339 0.01 ENSRNOT00000071779
similar to novel protein similar to esterases
chr17_+_53965562 0.01 ENSRNOT00000090387
geranylgeranyl diphosphate synthase 1
chr15_-_28044210 0.01 ENSRNOT00000033809
ribonuclease, RNase A family, 1-like 1 (pancreatic)
chr20_-_3166569 0.01 ENSRNOT00000091390

chr11_+_80742467 0.01 ENSRNOT00000002507
mannan-binding lectin serine peptidase 1
chr3_-_161246351 0.01 ENSRNOT00000020348
troponin C2, fast skeletal type
chr2_+_240642847 0.01 ENSRNOT00000079694
ubiquitin-conjugating enzyme E2D 3
chr10_-_86393141 0.01 ENSRNOT00000009485
migration and invasion enhancer 1
chr7_-_104541392 0.01 ENSRNOT00000078116
family with sequence similarity 49, member B
chrX_-_72034099 0.01 ENSRNOT00000004310
ERCC excision repair 6 like, spindle assembly checkpoint helicase
chr9_+_95398237 0.01 ENSRNOT00000025879
transient receptor potential cation channel, subfamily M, member 8
chr17_+_36691875 0.01 ENSRNOT00000074314
similar to High mobility group protein 4 (HMG-4) (High mobility group protein 2a) (HMG-2a)
chr11_+_31539016 0.01 ENSRNOT00000072856
interferon alpha and beta receptor subunit 2
chr8_+_111790678 0.01 ENSRNOT00000013265
topoisomerase (DNA) II binding protein 1
chr1_-_252116971 0.01 ENSRNOT00000035013
lipase, member O1
chr7_-_144993652 0.01 ENSRNOT00000087748
integrin subunit alpha 5
chr3_-_104504204 0.01 ENSRNOT00000049582
ryanodine receptor 3
chr1_+_166983175 0.01 ENSRNOT00000027028
anaphase promoting complex subunit 15
chr2_+_166348373 0.01 ENSRNOT00000033132
similar to retinoblastoma binding protein 4
chr1_+_22364551 0.01 ENSRNOT00000043157
trace amine-associated receptor 8a
chr19_-_10513349 0.01 ENSRNOT00000061270
adhesion G protein-coupled receptor G5
chr2_+_2903492 0.01 ENSRNOT00000062017
tetratricopeptide repeat domain 37
chr19_-_14945302 0.01 ENSRNOT00000079391

chr9_+_66058047 0.01 ENSRNOT00000071819
cyclin-dependent kinase 15
chr9_+_95161157 0.01 ENSRNOT00000071200
UDP glucuronosyltransferase family 1 member A5
chrM_+_10160 0.01 ENSRNOT00000042928
mitochondrially encoded NADH dehydrogenase 4
chrX_-_62690806 0.01 ENSRNOT00000018147
DNA polymerase alpha 1, catalytic subunit
chr5_+_108278217 0.01 ENSRNOT00000038972
DMRT-like family A1
chr6_-_54059119 0.01 ENSRNOT00000005521
histone deacetylase 9
chr2_-_149444548 0.01 ENSRNOT00000018600
purinergic receptor P2Y12
chr8_+_70447040 0.01 ENSRNOT00000016798
integrator complex subunit 14
chr14_-_45165207 0.01 ENSRNOT00000002960
Kruppel like factor 3
chr2_+_41442241 0.01 ENSRNOT00000067546
phosphodiesterase 4D
chr17_-_21577085 0.01 ENSRNOT00000020737
transmembrane protein 14C
chr17_-_76250537 0.01 ENSRNOT00000092693
UPF2 regulator of nonsense transcripts homolog (yeast)
chr6_+_18880737 0.01 ENSRNOT00000003432
alkB homolog 8, tRNA methyltransferase
chr2_+_118831350 0.01 ENSRNOT00000083720
phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
chr2_-_122641409 0.01 ENSRNOT00000068334
defective in cullin neddylation 1 domain containing 1
chr8_-_55144087 0.01 ENSRNOT00000039045
DIX domain containing 1
chr5_+_167141875 0.01 ENSRNOT00000089314
solute carrier family 2 member 5
chr1_+_79631668 0.01 ENSRNOT00000083546
ENSRNOT00000035286
MHC I like leukocyte 1
chr10_-_88000423 0.01 ENSRNOT00000076787
ENSRNOT00000046751
ENSRNOT00000091394
keratin 32
chr1_+_61786900 0.01 ENSRNOT00000090287

chr15_+_34234755 0.01 ENSRNOT00000059987
DDB1 and CUL4 associated factor 11
chr17_+_63635086 0.01 ENSRNOT00000020634
disco-interacting protein 2 homolog C
chr2_+_248398917 0.01 ENSRNOT00000045855
guanylate binding protein 1
chr8_-_128711221 0.01 ENSRNOT00000055888
xin actin-binding repeat containing 1
chr5_+_150459713 0.00 ENSRNOT00000081681
ENSRNOT00000074251
TATA-box binding protein associated factor 12
chr19_-_11669578 0.00 ENSRNOT00000026373
G protein subunit alpha o1
chr15_-_52399074 0.00 ENSRNOT00000018440
exportin 7
chr4_+_163349125 0.00 ENSRNOT00000084823
killer cell lectin-like receptor, family E, member 1
chr5_-_164648328 0.00 ENSRNOT00000090811
zinc finger protein 933
chr11_-_60546997 0.00 ENSRNOT00000083124
ENSRNOT00000050092
B and T lymphocyte associated
chr20_+_3155652 0.00 ENSRNOT00000042882
RT1 class Ib, locus S2
chr13_+_92264231 0.00 ENSRNOT00000066509
ENSRNOT00000004716
spectrin, alpha, erythrocytic 1
chr9_-_97290639 0.00 ENSRNOT00000026491
ENSRNOT00000056724
IQ motif containing with AAA domain 1

Network of associatons between targets according to the STRING database.

First level regulatory network of Emx1_Emx2

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.


View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0032759 antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway(GO:0002488) antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent(GO:0002489) TRAIL production(GO:0032639) regulation of TRAIL production(GO:0032679) positive regulation of TRAIL production(GO:0032759)
0.0 0.1 GO:0097156 fasciculation of motor neuron axon(GO:0097156)
0.0 0.1 GO:1901748 leukotriene D4 metabolic process(GO:1901748) leukotriene D4 biosynthetic process(GO:1901750)
0.0 0.1 GO:0001969 activation of membrane attack complex(GO:0001905) regulation of activation of membrane attack complex(GO:0001969)
0.0 0.1 GO:0050925 negative regulation of negative chemotaxis(GO:0050925)
0.0 0.1 GO:0060279 positive regulation of ovulation(GO:0060279)
0.0 0.1 GO:0010994 regulation of ubiquitin homeostasis(GO:0010993) free ubiquitin chain polymerization(GO:0010994)
0.0 0.0 GO:0060467 negative regulation of fertilization(GO:0060467) prevention of polyspermy(GO:0060468)
0.0 0.1 GO:0019371 cyclooxygenase pathway(GO:0019371)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0032398 MHC class Ib protein complex(GO:0032398)
0.0 0.1 GO:0043511 inhibin complex(GO:0043511)
0.0 0.1 GO:0097442 CA3 pyramidal cell dendrite(GO:0097442)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0070699 type II activin receptor binding(GO:0070699)
0.0 0.1 GO:0030881 beta-2-microglobulin binding(GO:0030881)
0.0 0.1 GO:0035727 lysophosphatidic acid binding(GO:0035727) lysophosphatidic acid receptor activity(GO:0070915)
0.0 0.1 GO:0005004 GPI-linked ephrin receptor activity(GO:0005004)