GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Dlx5 Links NCBI RGD Ensembl	ENSRNOG00000010905	distal-less homeobox 5
Dlx4 Links NCBI RGD Ensembl	ENSRNOG00000004399	distal-less homeobox 4

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Dlx5	rn6_v1_chr4_-_32392007_32392007	-0.55	3.3e-01	Click!
Dlx4	rn6_v1_chr10_-_82963919_82963919	-0.15	8.1e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr3_-_66417741 Show fit	0.60	ENSRNOT00000007662	Neurod1 Links NCBI RGD Ensembl Show fit	neuronal differentiation 1
chr2_+_145174876 Show fit	0.55	ENSRNOT00000040631	Mab21l1 Links NCBI RGD Ensembl Show fit	mab-21 like 1
chr2_-_185852759 Show fit	0.41	ENSRNOT00000049461	Mab21l2 Links NCBI RGD Ensembl Show fit	mab-21 like 2
chr20_-_9855443 Show fit	0.30	ENSRNOT00000090275 ENSRNOT00000066266	Tff3 Links NCBI RGD Ensembl Show fit	trefoil factor 3
chr7_-_13751271 Show fit	0.28	ENSRNOT00000009931	Slc1a6 Links NCBI RGD Ensembl Show fit	solute carrier family 1 member 6
chr12_-_17186679 Show fit	0.27	ENSRNOT00000001730	Uncx Links NCBI RGD Ensembl Show fit	UNC homeobox
chr5_-_151459037 Show fit	0.26	ENSRNOT00000064472 ENSRNOT00000087836	Sytl1 Links NCBI RGD Ensembl Show fit	synaptotagmin-like 1
chrM_+_7758 Show fit	0.23	ENSRNOT00000046201	Mt-atp8 Links NCBI RGD Ensembl Show fit	mitochondrially encoded ATP synthase 8
chr4_+_148782479 Show fit	0.22	ENSRNOT00000018133	LOC500300 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein MGC6835
chr2_+_58724855 Show fit	0.21	ENSRNOT00000089609	Capsl Links NCBI RGD Ensembl Show fit	calcyphosine-like
chr4_+_94696965 Show fit	0.20	ENSRNOT00000064696	Grid2 Links NCBI RGD Ensembl Show fit	glutamate ionotropic receptor delta type subunit 2
chrX_-_123980357 Show fit	0.18	ENSRNOT00000049435	Rhox8 Links NCBI RGD Ensembl Show fit	reproductive homeobox 8
chr1_-_71373605 Show fit	0.17	ENSRNOT00000034854	Galp Links NCBI RGD Ensembl Show fit	galanin-like peptide
chrM_+_9451 Show fit	0.17	ENSRNOT00000041241	Mt-nd3 Links NCBI RGD Ensembl Show fit	mitochondrially encoded NADH dehydrogenase 3
chr7_-_139223116 Show fit	0.16	ENSRNOT00000086559	Endou Links NCBI RGD Ensembl Show fit	endonuclease, poly(U)-specific
chr15_+_87722221 Show fit	0.16	ENSRNOT00000082688	Scel Links NCBI RGD Ensembl Show fit	sciellin
chr5_-_22769907 Show fit	0.15	ENSRNOT00000047805 ENSRNOT00000076167 ENSRNOT00000076507 ENSRNOT00000076113 ENSRNOT00000083779	Asph Links NCBI RGD Ensembl Show fit	aspartate-beta-hydroxylase
chr17_-_2705123 Show fit	0.15	ENSRNOT00000024940	Olr1652 Links NCBI RGD Ensembl Show fit	olfactory receptor 1652
chr17_+_24416651 Show fit	0.14	ENSRNOT00000024458	Cd83 Links NCBI RGD Ensembl Show fit	CD83 molecule
chr2_-_147819335 Show fit	0.14	ENSRNOT00000057909	Ankub1 Links NCBI RGD Ensembl Show fit	ankyrin repeat and ubiquitin domain containing 1
chr10_-_63176463 Show fit	0.14	ENSRNOT00000004717	Slc6a4 Links NCBI RGD Ensembl Show fit	solute carrier family 6 member 4
chr6_-_123577695 Show fit	0.14	ENSRNOT00000006604	Foxn3 Links NCBI RGD Ensembl Show fit	forkhead box N3
chrM_+_3904 Show fit	0.13	ENSRNOT00000040993	Mt-nd2 Links NCBI RGD Ensembl Show fit	mitochondrially encoded NADH dehydrogenase 2
chr1_-_38538987 Show fit	0.13	ENSRNOT00000090406 ENSRNOT00000071275	LOC102551340 Links NCBI RGD Ensembl Show fit	zinc finger protein 728-like
chr7_+_144052061 Show fit	0.13	ENSRNOT00000020103 ENSRNOT00000091378	Amhr2 Links NCBI RGD Ensembl Show fit	anti-Mullerian hormone receptor type 2
chr5_+_6373583 Show fit	0.12	ENSRNOT00000084749	AABR07046778.1 Links NCBI RGD Ensembl Show fit
chr9_+_95161157 Show fit	0.12	ENSRNOT00000071200	Ugt1a5 Links NCBI RGD Ensembl Show fit	UDP glucuronosyltransferase family 1 member A5
chr5_+_24410863 Show fit	0.12	ENSRNOT00000010591	Tp53inp1 Links NCBI RGD Ensembl Show fit	tumor protein p53 inducible nuclear protein 1
chr2_+_187951344 Show fit	0.11	ENSRNOT00000027123	Ssr2 Links NCBI RGD Ensembl Show fit	signal sequence receptor, beta
chrX_+_131617798 Show fit	0.11	ENSRNOT00000074384	Prr32 Links NCBI RGD Ensembl Show fit	proline rich 32
chr4_+_157726941 Show fit	0.11	ENSRNOT00000025081	Vamp1 Links NCBI RGD Ensembl Show fit	vesicle-associated membrane protein 1
chr2_+_178117466 Show fit	0.11	ENSRNOT00000065115 ENSRNOT00000084198	LOC499643 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein FLJ25371
chr3_-_7498555 Show fit	0.11	ENSRNOT00000017725	Barhl1 Links NCBI RGD Ensembl Show fit	BarH-like homeobox 1
chr10_-_88670430 Show fit	0.10	ENSRNOT00000025547	Hcrt Links NCBI RGD Ensembl Show fit	hypocretin neuropeptide precursor
chr1_-_198104109 Show fit	0.10	ENSRNOT00000026186	Sult1a1 Links NCBI RGD Ensembl Show fit	sulfotransferase family 1A member 1
chr1_+_264260505 Show fit	0.10	ENSRNOT00000018815	Wnt8b Links NCBI RGD Ensembl Show fit	wingless-type MMTV integration site family, member 8B
chr2_-_205212681 Show fit	0.10	ENSRNOT00000022575	Tshb Links NCBI RGD Ensembl Show fit	thyroid stimulating hormone, beta
chr7_-_54855557 Show fit	0.10	ENSRNOT00000039475	Glipr1l1 Links NCBI RGD Ensembl Show fit	GLI pathogenesis-related 1 like 1
chr1_-_67065797 Show fit	0.10	ENSRNOT00000048152	Vom1r46 Links NCBI RGD Ensembl Show fit	vomeronasal 1 receptor 46
chr1_+_86972244 Show fit	0.10	ENSRNOT00000036907	Rinl Links NCBI RGD Ensembl Show fit	Ras and Rab interactor-like
chr19_-_37528011 Show fit	0.10	ENSRNOT00000059628	Agrp Links NCBI RGD Ensembl Show fit	agouti related neuropeptide
chrM_+_7919 Show fit	0.09	ENSRNOT00000046108	Mt-atp6 Links NCBI RGD Ensembl Show fit	mitochondrially encoded ATP synthase 6
chr3_-_40477754 Show fit	0.09	ENSRNOT00000091168	AABR07052166.1 Links NCBI RGD Ensembl Show fit
chr3_+_138174054 Show fit	0.09	ENSRNOT00000007946	Banf2 Links NCBI RGD Ensembl Show fit	barrier to autointegration factor 2
chr1_+_55219773 Show fit	0.09	ENSRNOT00000041610	RGD1561667 Links NCBI RGD Ensembl Show fit	similar to putative protein kinase
chr13_-_44345735 Show fit	0.09	ENSRNOT00000005006	Tmem163 Links NCBI RGD Ensembl Show fit	transmembrane protein 163
chr9_+_117795132 Show fit	0.09	ENSRNOT00000086943	Akain1 Links NCBI RGD Ensembl Show fit	A-kinase anchor inhibitor 1
chr19_-_28751584 Show fit	0.09	ENSRNOT00000079270	AABR07043456.1 Links NCBI RGD Ensembl Show fit
chr1_+_213886775 Show fit	0.09	ENSRNOT00000020864	Pkp3 Links NCBI RGD Ensembl Show fit	plakophilin 3
chr10_+_56662561 Show fit	0.09	ENSRNOT00000025254	Asgr1 Links NCBI RGD Ensembl Show fit	asialoglycoprotein receptor 1
chr3_+_150801289 Show fit	0.09	ENSRNOT00000035060	Map1lc3a Links NCBI RGD Ensembl Show fit	microtubule-associated protein 1 light chain 3 alpha
chr19_-_49448072 Show fit	0.09	ENSRNOT00000014997	Cmc2 Links NCBI RGD Ensembl Show fit	C-x(9)-C motif containing 2
chr7_+_120153184 Show fit	0.09	ENSRNOT00000013538	Lgals1 Links NCBI RGD Ensembl Show fit	galectin 1
chr17_-_43807540 Show fit	0.09	ENSRNOT00000074763	LOC684762 Links NCBI RGD Ensembl Show fit	similar to CG31613-PA
chr13_+_89386023 Show fit	0.08	ENSRNOT00000086223	Fcgr3a Links NCBI RGD Ensembl Show fit	Fc fragment of IgG receptor IIIa
chr15_+_33606124 Show fit	0.08	ENSRNOT00000065210	AC115371.1 Links NCBI RGD Ensembl Show fit
chrX_-_88321834 Show fit	0.08	ENSRNOT00000020364	LOC100909548 Links NCBI RGD Ensembl Show fit	cation-dependent mannose-6-phosphate receptor-like
chr20_+_1749716 Show fit	0.08	ENSRNOT00000048856	Olr1735 Links NCBI RGD Ensembl Show fit	olfactory receptor 1735
chr3_-_161294125 Show fit	0.08	ENSRNOT00000021143	Spata25 Links NCBI RGD Ensembl Show fit	spermatogenesis associated 25
chr10_+_55626741 Show fit	0.08	ENSRNOT00000008492	Aurkb Links NCBI RGD Ensembl Show fit	aurora kinase B
chrX_+_11084317 Show fit	0.08	ENSRNOT00000031808 ENSRNOT00000093745	RGD1565685 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 1810030O07
chr13_-_47916185 Show fit	0.08	ENSRNOT00000087793	Dyrk3 Links NCBI RGD Ensembl Show fit	dual specificity tyrosine phosphorylation regulated kinase 3
chr10_+_88227360 Show fit	0.08	ENSRNOT00000041033	Eif1 Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 1
chr8_-_72204730 Show fit	0.08	ENSRNOT00000023810	Fbxl22 Links NCBI RGD Ensembl Show fit	F-box and leucine-rich repeat protein 22
chr7_+_136182224 Show fit	0.08	ENSRNOT00000008159	Tmem117 Links NCBI RGD Ensembl Show fit	transmembrane protein 117
chr10_+_55712043 Show fit	0.08	ENSRNOT00000010141	Aloxe3 Links NCBI RGD Ensembl Show fit	arachidonate lipoxygenase 3
chr6_+_8886591 Show fit	0.08	ENSRNOT00000091510 ENSRNOT00000089174	Six3 Links NCBI RGD Ensembl Show fit	SIX homeobox 3
chr20_-_9291610 Show fit	0.08	ENSRNOT00000000650	Glo1 Links NCBI RGD Ensembl Show fit	glyoxalase 1
chr12_+_18679789 Show fit	0.08	ENSRNOT00000001863	Cyp3a9 Links NCBI RGD Ensembl Show fit	cytochrome P450, family 3, subfamily a, polypeptide 9
chr3_-_101547478 Show fit	0.08	ENSRNOT00000006203	Fibin Links NCBI RGD Ensembl Show fit	fin bud initiation factor homolog (zebrafish)
chr1_-_80783898 Show fit	0.08	ENSRNOT00000045306	Ceacam16 Links NCBI RGD Ensembl Show fit	carcinoembryonic antigen-related cell adhesion molecule 16
chr4_-_162025090 Show fit	0.08	ENSRNOT00000085887 ENSRNOT00000009904	Klrb1a Links NCBI RGD Ensembl Show fit	killer cell lectin-like receptor subfamily B, member 1A
chrM_+_9870 Show fit	0.08	ENSRNOT00000044582	Mt-nd4l Links NCBI RGD Ensembl Show fit	mitochondrially encoded NADH 4L dehydrogenase
chr2_+_93758919 Show fit	0.08	ENSRNOT00000077782	Fabp12 Links NCBI RGD Ensembl Show fit	fatty acid binding protein 12
chr10_+_55627025 Show fit	0.07	ENSRNOT00000091016	Aurkb Links NCBI RGD Ensembl Show fit	aurora kinase B
chr16_-_75346122 Show fit	0.07	ENSRNOT00000018529	Defa24 Links NCBI RGD Ensembl Show fit	defensin alpha 24
chr20_+_4966817 Show fit	0.07	ENSRNOT00000081527 ENSRNOT00000081265	Lsm2 Links NCBI RGD Ensembl Show fit	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
chr2_+_266141581 Show fit	0.07	ENSRNOT00000078187 ENSRNOT00000051951	Rpe65 Links NCBI RGD Ensembl Show fit	RPE65, retinoid isomerohydrolase
chr14_-_79464770 Show fit	0.07	ENSRNOT00000008932	Grpel1 Links NCBI RGD Ensembl Show fit	GrpE-like 1, mitochondrial
chr4_-_117575154 Show fit	0.07	ENSRNOT00000075813	LOC102556148 Links NCBI RGD Ensembl Show fit	probable N-acetyltransferase CML2-like
chr7_+_140608434 Show fit	0.07	ENSRNOT00000001163	AC114446.1 Links NCBI RGD Ensembl Show fit
chr5_-_12526962 Show fit	0.07	ENSRNOT00000092104	St18 Links NCBI RGD Ensembl Show fit	suppression of tumorigenicity 18
chr1_-_116153722 Show fit	0.07	ENSRNOT00000041605	Fpr3 Links NCBI RGD Ensembl Show fit	formyl peptide receptor 3
chr3_+_47578384 Show fit	0.07	ENSRNOT00000082769	Psmd14 Links NCBI RGD Ensembl Show fit	proteasome 26S subunit, non-ATPase 14
chr12_+_41463922 Show fit	0.07	ENSRNOT00000089378	Cfap73 Links NCBI RGD Ensembl Show fit	cilia and flagella associated protein 73
chr9_-_1012450 Show fit	0.07	ENSRNOT00000051449	LOC100359951 Links NCBI RGD Ensembl Show fit	ribosomal protein S20-like
chrX_-_64702441 Show fit	0.07	ENSRNOT00000051132	Amer1 Links NCBI RGD Ensembl Show fit	APC membrane recruitment protein 1
chr4_-_30338679 Show fit	0.07	ENSRNOT00000012050	Pon3 Links NCBI RGD Ensembl Show fit	paraoxonase 3
chr4_-_159399634 Show fit	0.07	ENSRNOT00000089193	Ndufa9 Links NCBI RGD Ensembl Show fit	NADH:ubiquinone oxidoreductase subunit A9
chr15_+_11298478 Show fit	0.07	ENSRNOT00000007672	Lrrc3b Links NCBI RGD Ensembl Show fit	leucine rich repeat containing 3B
chr15_+_44411865 Show fit	0.07	ENSRNOT00000017566	Kctd9 Links NCBI RGD Ensembl Show fit	potassium channel tetramerization domain containing 9
chr10_+_56662242 Show fit	0.07	ENSRNOT00000086919	Asgr1 Links NCBI RGD Ensembl Show fit	asialoglycoprotein receptor 1
chr1_-_102741581 Show fit	0.07	ENSRNOT00000016254	LOC691143 Links NCBI RGD Ensembl Show fit	similar to Serum amyloid A-3 protein precursor
chr12_+_19196611 Show fit	0.07	ENSRNOT00000001801	Azgp1 Links NCBI RGD Ensembl Show fit	alpha-2-glycoprotein 1, zinc-binding
chr19_+_320906 Show fit	0.07	ENSRNOT00000041664	AABR07042611.1 Links NCBI RGD Ensembl Show fit
chrX_+_28593405 Show fit	0.06	ENSRNOT00000071708	Tmsb4x Links NCBI RGD Ensembl Show fit	thymosin beta 4, X-linked
chr3_-_94808861 Show fit	0.06	ENSRNOT00000038464	Prrg4 Links NCBI RGD Ensembl Show fit	proline rich and Gla domain 4
chr5_-_134638150 Show fit	0.06	ENSRNOT00000013480	Tex38 Links NCBI RGD Ensembl Show fit	testis expressed 38
chr20_+_13817795 Show fit	0.06	ENSRNOT00000036518	Gstt3 Links NCBI RGD Ensembl Show fit	glutathione S-transferase, theta 3
chr2_+_200397967 Show fit	0.06	ENSRNOT00000025821	Reg4 Links NCBI RGD Ensembl Show fit	regenerating family member 4
chr1_-_101095594 Show fit	0.06	ENSRNOT00000027944	Fcgrt Links NCBI RGD Ensembl Show fit	Fc fragment of IgG receptor and transporter
chr4_+_31333970 Show fit	0.06	ENSRNOT00000064866	LOC100911994 Links NCBI RGD Ensembl Show fit	coiled-coil domain-containing protein 132-like
chr4_+_147844658 Show fit	0.06	ENSRNOT00000042673	H1foo Links NCBI RGD Ensembl Show fit	H1 histone family, member O, oocyte-specific
chr1_+_169145445 Show fit	0.06	ENSRNOT00000034019	LOC499219 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC499219
chr7_-_130350570 Show fit	0.06	ENSRNOT00000055805	Odf3b Links NCBI RGD Ensembl Show fit	outer dense fiber of sperm tails 3B
chr5_+_137257287 Show fit	0.06	ENSRNOT00000037160	Elovl1 Links NCBI RGD Ensembl Show fit	ELOVL fatty acid elongase 1
chrM_+_10160 Show fit	0.06	ENSRNOT00000042928	Mt-nd4 Links NCBI RGD Ensembl Show fit	mitochondrially encoded NADH dehydrogenase 4
chr18_-_27520295 Show fit	0.06	ENSRNOT00000027544	Gfra3 Links NCBI RGD Ensembl Show fit	GDNF family receptor alpha 3
chr17_+_76008807 Show fit	0.06	ENSRNOT00000070895	Echdc3 Links NCBI RGD Ensembl Show fit	enoyl CoA hydratase domain containing 3
chr13_-_102643223 Show fit	0.06	ENSRNOT00000003155	Hlx Links NCBI RGD Ensembl Show fit	H2.0-like homeobox
chr4_-_176528110 Show fit	0.06	ENSRNOT00000049569	Slco1a2 Links NCBI RGD Ensembl Show fit	solute carrier organic anion transporter family, member 1A2
chr4_-_176909075 Show fit	0.06	ENSRNOT00000067489	Abcc9 Links NCBI RGD Ensembl Show fit	ATP binding cassette subfamily C member 9
chr1_-_215536980 Show fit	0.06	ENSRNOT00000027344	Ifitm10 Links NCBI RGD Ensembl Show fit	interferon induced transmembrane protein 10
chr4_-_51844331 Show fit	0.06	ENSRNOT00000003593	Gpr37 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 37
chr3_-_2490392 Show fit	0.06	ENSRNOT00000014993	Ssna1 Links NCBI RGD Ensembl Show fit	SS nuclear autoantigen 1
chr5_+_78384444 Show fit	0.06	ENSRNOT00000034978	LOC500475 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein 4933430I17
chr3_-_103745236 Show fit	0.06	ENSRNOT00000006876	Nutm1 Links NCBI RGD Ensembl Show fit	NUT midline carcinoma, family member 1
chr1_+_213636093 Show fit	0.06	ENSRNOT00000019642	Psmd13 Links NCBI RGD Ensembl Show fit	proteasome 26S subunit, non-ATPase 13
chr8_+_99632803 Show fit	0.06	ENSRNOT00000087190	Plscr1 Links NCBI RGD Ensembl Show fit	phospholipid scramblase 1
chr10_+_13836128 Show fit	0.06	ENSRNOT00000012720	Pgp Links NCBI RGD Ensembl Show fit	phosphoglycolate phosphatase
chr10_-_58608907 Show fit	0.06	ENSRNOT00000010533	Aipl1 Links NCBI RGD Ensembl Show fit	aryl hydrocarbon receptor-interacting protein-like 1
chr3_-_8955538 Show fit	0.06	ENSRNOT00000040570	LOC686066 Links NCBI RGD Ensembl Show fit	similar to 60S ribosomal protein L38
chr1_-_282492912 Show fit	0.06	ENSRNOT00000047883	AABR07007130.1 Links NCBI RGD Ensembl Show fit
chr4_+_6827429 Show fit	0.06	ENSRNOT00000071737	Rheb Links NCBI RGD Ensembl Show fit	Ras homolog enriched in brain
chr8_+_91820783 Show fit	0.06	ENSRNOT00000043351	RGD1560917 Links NCBI RGD Ensembl Show fit	similar to mitochondrial ribosomal protein L41
chrX_+_63542191 Show fit	0.06	ENSRNOT00000073955	Apoo Links NCBI RGD Ensembl Show fit	apolipoprotein O
chr12_-_19167015 Show fit	0.06	ENSRNOT00000001797	Gjc3 Links NCBI RGD Ensembl Show fit	gap junction protein, gamma 3
chr9_+_98113346 Show fit	0.06	ENSRNOT00000026912	Prlh Links NCBI RGD Ensembl Show fit	prolactin releasing hormone
chr15_-_30147793 Show fit	0.06	ENSRNOT00000060399	AABR07017693.1 Links NCBI RGD Ensembl Show fit
chr6_+_2216623 Show fit	0.06	ENSRNOT00000008045	Rmdn2 Links NCBI RGD Ensembl Show fit	regulator of microtubule dynamics 2
chrY_-_1398030 Show fit	0.06	ENSRNOT00000088719	Usp9y Links NCBI RGD Ensembl Show fit	ubiquitin specific peptidase 9, Y-linked
chr20_+_44680449 Show fit	0.06	ENSRNOT00000000728	Traf3ip2 Links NCBI RGD Ensembl Show fit	Traf3 interacting protein 2
chr7_+_29909120 Show fit	0.05	ENSRNOT00000049362	AABR07056556.1 Links NCBI RGD Ensembl Show fit
chr3_-_46942966 Show fit	0.05	ENSRNOT00000087439	Rbms1 Links NCBI RGD Ensembl Show fit	RNA binding motif, single stranded interacting protein 1
chr13_+_67545430 Show fit	0.05	ENSRNOT00000003405	Pdc Links NCBI RGD Ensembl Show fit	phosducin
chr9_+_94562839 Show fit	0.05	ENSRNOT00000022308	RGD1311447 Links NCBI RGD Ensembl Show fit	LOC363276
chr1_+_105285419 Show fit	0.05	ENSRNOT00000089693	Slc6a5 Links NCBI RGD Ensembl Show fit	solute carrier family 6 member 5
chr10_+_56445647 Show fit	0.05	ENSRNOT00000056870	Tmem256 Links NCBI RGD Ensembl Show fit	transmembrane protein 256
chr5_+_128450680 Show fit	0.05	ENSRNOT00000010700	Txndc12 Links NCBI RGD Ensembl Show fit	thioredoxin domain containing 12
chr19_+_37873515 Show fit	0.05	ENSRNOT00000026163 ENSRNOT00000089921	Pskh1 Links NCBI RGD Ensembl Show fit	protein serine kinase H1
chr4_-_170912629 Show fit	0.05	ENSRNOT00000055691	Erp27 Links NCBI RGD Ensembl Show fit	endoplasmic reticulum protein 27
chr14_-_21299068 Show fit	0.05	ENSRNOT00000065778	Amtn Links NCBI RGD Ensembl Show fit	amelotin
chr1_-_216663720 Show fit	0.05	ENSRNOT00000078944 ENSRNOT00000077409	Cdkn1c Links NCBI RGD Ensembl Show fit	cyclin-dependent kinase inhibitor 1C
chr4_+_70977556 Show fit	0.05	ENSRNOT00000031984	LOC680112 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC680112
chr7_+_72924799 Show fit	0.05	ENSRNOT00000008969	Laptm4b Links NCBI RGD Ensembl Show fit	lysosomal protein transmembrane 4 beta
chr19_-_41349681 Show fit	0.05	ENSRNOT00000080694 ENSRNOT00000059147	Hydin Links NCBI RGD Ensembl Show fit	Hydin, axonemal central pair apparatus protein
chr3_-_148493225 Show fit	0.05	ENSRNOT00000012141	Pdrg1 Links NCBI RGD Ensembl Show fit	p53 and DNA damage regulated 1
chr1_+_22332090 Show fit	0.05	ENSRNOT00000091252	AABR07000663.1 Links NCBI RGD Ensembl Show fit	trace amine-associated receptor 8c (Taar8c), mRNA
chr8_-_22785671 Show fit	0.05	ENSRNOT00000045384	Spc24 Links NCBI RGD Ensembl Show fit	SPC24, NDC80 kinetochore complex component
chr3_+_16846412 Show fit	0.05	ENSRNOT00000074266	AABR07051551.1 Links NCBI RGD Ensembl Show fit
chr11_-_17684903 Show fit	0.05	ENSRNOT00000051213	Tmprss15 Links NCBI RGD Ensembl Show fit	transmembrane protease, serine 15
chr7_-_143324536 Show fit	0.05	ENSRNOT00000011644	Krt5 Links NCBI RGD Ensembl Show fit	keratin 5
chrM_+_8599 Show fit	0.05	ENSRNOT00000049683	Mt-cox3 Links NCBI RGD Ensembl Show fit	mitochondrially encoded cytochrome C oxidase III
chr10_+_74413989 Show fit	0.05	ENSRNOT00000036098	Ska2 Links NCBI RGD Ensembl Show fit	spindle and kinetochore associated complex subunit 2
chr1_-_165606375 Show fit	0.05	ENSRNOT00000024290	Mrpl48 Links NCBI RGD Ensembl Show fit	mitochondrial ribosomal protein L48
chr7_-_28711761 Show fit	0.05	ENSRNOT00000006249	Parpbp Links NCBI RGD Ensembl Show fit	PARP1 binding protein
chr10_-_83898527 Show fit	0.05	ENSRNOT00000009815	Atp5g1 Links NCBI RGD Ensembl Show fit	ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
chr13_-_27192592 Show fit	0.05	ENSRNOT00000040021	Serpinb3 Links NCBI RGD Ensembl Show fit	serpin family B member 3
chr16_-_31301880 Show fit	0.05	ENSRNOT00000084847 ENSRNOT00000083943	AABR07025272.1 Links NCBI RGD Ensembl Show fit
chr1_+_196095214 Show fit	0.05	ENSRNOT00000080741	LOC691716 Links NCBI RGD Ensembl Show fit	similar to ribosomal protein S15a
chr10_-_44147035 Show fit	0.05	ENSRNOT00000041113	Olr1424 Links NCBI RGD Ensembl Show fit	olfactory receptor 1424
chr11_+_70056624 Show fit	0.05	ENSRNOT00000002447	AC133403.1 Links NCBI RGD Ensembl Show fit
chr3_+_94530586 Show fit	0.05	ENSRNOT00000067860	Cstf3 Links NCBI RGD Ensembl Show fit	cleavage stimulation factor subunit 3
chr11_+_36851038 Show fit	0.05	ENSRNOT00000002221 ENSRNOT00000061047	Pcp4 Links NCBI RGD Ensembl Show fit	Purkinje cell protein 4
chr10_+_103266296 Show fit	0.05	ENSRNOT00000038852	Dnai2 Links NCBI RGD Ensembl Show fit	dynein, axonemal, intermediate chain 2
chr2_-_27287605 Show fit	0.05	ENSRNOT00000034041	Ankdd1b Links NCBI RGD Ensembl Show fit	ankyrin repeat and death domain containing 1B
chr14_+_22375955 Show fit	0.05	ENSRNOT00000063915 ENSRNOT00000034784	Ugt2b37 Links NCBI RGD Ensembl Show fit	UDP-glucuronosyltransferase 2 family, member 37
chr8_-_96516975 Show fit	0.05	ENSRNOT00000067996	RGD1560775 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 4930579C12 gene
chr1_-_220136470 Show fit	0.05	ENSRNOT00000026812	Actn3 Links NCBI RGD Ensembl Show fit	actinin alpha 3
chr10_+_71217966 Show fit	0.05	ENSRNOT00000076192	Hnf1b Links NCBI RGD Ensembl Show fit	HNF1 homeobox B
chr16_-_6669045 Show fit	0.05	ENSRNOT00000067639	Prkcd Links NCBI RGD Ensembl Show fit	protein kinase C, delta
chr7_+_18683553 Show fit	0.05	ENSRNOT00000009425	Ndufa7 Links NCBI RGD Ensembl Show fit	NADH:ubiquinone oxidoreductase subunit A7
chr16_+_54332660 Show fit	0.05	ENSRNOT00000037685	Mtus1 Links NCBI RGD Ensembl Show fit	microtubule associated tumor suppressor 1
chr8_+_99625545 Show fit	0.05	ENSRNOT00000010689 ENSRNOT00000056727	Plscr1 Links NCBI RGD Ensembl Show fit	phospholipid scramblase 1
chr15_-_32888095 Show fit	0.05	ENSRNOT00000012233	Dad1 Links NCBI RGD Ensembl Show fit	defender against cell death 1
chr2_-_30246010 Show fit	0.05	ENSRNOT00000023900	Mccc2 Links NCBI RGD Ensembl Show fit	methylcrotonoyl-CoA carboxylase 2
chr7_+_107413691 Show fit	0.05	ENSRNOT00000007587	Phf20l1 Links NCBI RGD Ensembl Show fit	PHD finger protein 20-like protein 1
chr9_-_73948583 Show fit	0.05	ENSRNOT00000018097	Myl1 Links NCBI RGD Ensembl Show fit	myosin, light chain 1
chr16_+_37177443 Show fit	0.05	ENSRNOT00000014083	Cep44 Links NCBI RGD Ensembl Show fit	centrosomal protein 44
chr10_+_13230158 Show fit	0.05	ENSRNOT00000075648	Csap1 Links NCBI RGD Ensembl Show fit	common salivary protein 1
chr4_-_158705885 Show fit	0.05	ENSRNOT00000087115 ENSRNOT00000026685	Ntf3 Links NCBI RGD Ensembl Show fit	neurotrophin 3
chr10_-_72196437 Show fit	0.05	ENSRNOT00000029769	Pigw Links NCBI RGD Ensembl Show fit	phosphatidylinositol glycan anchor biosynthesis, class W
chr5_-_17061361 Show fit	0.05	ENSRNOT00000089318	Penk Links NCBI RGD Ensembl Show fit	proenkephalin
chr14_-_6533524 Show fit	0.05	ENSRNOT00000079795	Abcg3l1 Links NCBI RGD Ensembl Show fit	ATP-binding cassette, subfamily G (WHITE), member 3-like 1
chr8_+_122076759 Show fit	0.05	ENSRNOT00000012545	Clasp2 Links NCBI RGD Ensembl Show fit	cytoplasmic linker associated protein 2
chr1_-_224698514 Show fit	0.05	ENSRNOT00000024234	Slc22a25 Links NCBI RGD Ensembl Show fit	solute carrier family 22, member 25
chrX_-_77675487 Show fit	0.05	ENSRNOT00000042799	Cysltr1 Links NCBI RGD Ensembl Show fit	cysteinyl leukotriene receptor 1
chr5_-_174921 Show fit	0.05	ENSRNOT00000056239	Tipinl1 Links NCBI RGD Ensembl Show fit	TIMELESS interacting protein like 1
chr19_+_37282018 Show fit	0.05	ENSRNOT00000021723	Tmem208 Links NCBI RGD Ensembl Show fit	transmembrane protein 208
chr5_-_134927235 Show fit	0.05	ENSRNOT00000016751	Uqcrh Links NCBI RGD Ensembl Show fit	ubiquinol-cytochrome c reductase hinge protein
chr12_-_21746236 Show fit	0.05	ENSRNOT00000001869	LOC102550456 Links NCBI RGD Ensembl Show fit	TSC22 domain family protein 4-like
chr1_+_227892956 Show fit	0.05	ENSRNOT00000028483	AABR07006278.1 Links NCBI RGD Ensembl Show fit
chr2_-_187706300 Show fit	0.05	ENSRNOT00000092349 ENSRNOT00000026414	Tmem79 Links NCBI RGD Ensembl Show fit	transmembrane protein 79
chr1_+_102924059 Show fit	0.05	ENSRNOT00000078137	AC099150.1 Links NCBI RGD Ensembl Show fit
chr14_-_84662143 Show fit	0.04	ENSRNOT00000057529 ENSRNOT00000080078	Hormad2 Links NCBI RGD Ensembl Show fit	HORMA domain containing 2
chr10_-_87459652 Show fit	0.04	ENSRNOT00000018804	Krt40 Links NCBI RGD Ensembl Show fit	keratin 40
chr2_-_197991574 Show fit	0.04	ENSRNOT00000085632	Ciart Links NCBI RGD Ensembl Show fit	circadian associated repressor of transcription
chr10_-_14324170 Show fit	0.04	ENSRNOT00000035513 ENSRNOT00000090587	Hn1l Links NCBI RGD Ensembl Show fit	hematological and neurological expressed 1-like
chr2_-_197991198 Show fit	0.04	ENSRNOT00000056322	Ciart Links NCBI RGD Ensembl Show fit	circadian associated repressor of transcription
chr6_-_91581262 Show fit	0.04	ENSRNOT00000034507	AABR07064716.1 Links NCBI RGD Ensembl Show fit

View svg image
View png image

Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.6	GO:0060729	intestinal epithelial structure maintenance(GO:0060729)
0.0	0.1	GO:0036446	myofibroblast differentiation(GO:0036446) response to methyl methanesulfonate(GO:0072702) cellular response to methyl methanesulfonate(GO:0072703) regulation of myofibroblast differentiation(GO:1904760)
0.0	0.2	GO:0043988	histone H3-S28 phosphorylation(GO:0043988)
0.0	0.3	GO:0035726	common myeloid progenitor cell proliferation(GO:0035726)
0.0	0.1	GO:0042264	peptidyl-aspartic acid hydroxylation(GO:0042264)
0.0	0.1	GO:0032227	negative regulation of synaptic transmission, dopaminergic(GO:0032227)
0.0	0.1	GO:0070172	positive regulation of tooth mineralization(GO:0070172)
0.0	0.1	GO:0014016	neuroblast differentiation(GO:0014016)
0.0	0.1	GO:0033123	positive regulation of purine nucleotide catabolic process(GO:0033123)
0.0	0.1	GO:0007468	regulation of rhodopsin gene expression(GO:0007468)
0.0	0.1	GO:0032713	negative regulation of interleukin-4 production(GO:0032713)
0.0	0.1	GO:0009804	coumarin metabolic process(GO:0009804)
0.0	0.1	GO:1901227	negative regulation of transcription from RNA polymerase II promoter involved in heart development(GO:1901227)
0.0	0.1	GO:0050427	purine ribonucleoside bisphosphate metabolic process(GO:0034035) 3'-phosphoadenosine 5'-phosphosulfate metabolic process(GO:0050427)
0.0	0.1	GO:0002317	plasma cell differentiation(GO:0002317)
0.0	0.5	GO:0010172	embryonic body morphogenesis(GO:0010172)
0.0	0.1	GO:0060830	ciliary receptor clustering involved in smoothened signaling pathway(GO:0060830)
0.0	0.1	GO:0015942	formate metabolic process(GO:0015942) histidine catabolic process to glutamate and formamide(GO:0019556) formamide metabolic process(GO:0043606)
0.0	0.1	GO:0018343	protein farnesylation(GO:0018343)
0.0	0.1	GO:0002933	lipid hydroxylation(GO:0002933) alkaloid catabolic process(GO:0009822)
0.0	0.1	GO:0002159	desmosome assembly(GO:0002159)
0.0	0.1	GO:1904158	axonemal central apparatus assembly(GO:1904158)
0.0	0.2	GO:0052697	xenobiotic glucuronidation(GO:0052697)
0.0	0.1	GO:0002386	immune response in mucosal-associated lymphoid tissue(GO:0002386)
0.0	0.1	GO:0000958	mitochondrial mRNA catabolic process(GO:0000958) positive regulation of mitochondrial RNA catabolic process(GO:0000962)
0.0	0.1	GO:0035425	autocrine signaling(GO:0035425)
0.0	0.1	GO:0002430	complement receptor mediated signaling pathway(GO:0002430)
0.0	0.0	GO:0035565	regulation of pronephros size(GO:0035565) hepatoblast differentiation(GO:0061017)
0.0	0.3	GO:0089711	L-glutamate transmembrane transport(GO:0089711)
0.0	0.0	GO:0060697	positive regulation of phospholipid catabolic process(GO:0060697)
0.0	0.1	GO:0035617	stress granule disassembly(GO:0035617)
0.0	0.0	GO:0006552	leucine catabolic process(GO:0006552)
0.0	0.5	GO:0015986	energy coupled proton transport, down electrochemical gradient(GO:0015985) ATP synthesis coupled proton transport(GO:0015986)
0.0	0.1	GO:0051121	hepoxilin metabolic process(GO:0051121) hepoxilin biosynthetic process(GO:0051122)
0.0	0.0	GO:0042940	D-amino acid transport(GO:0042940)
0.0	0.1	GO:2000373	phosphatidylserine exposure on apoptotic cell surface(GO:0070782) regulation of DNA topoisomerase (ATP-hydrolyzing) activity(GO:2000371) positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity(GO:2000373)
0.0	0.0	GO:0042335	cuticle development(GO:0042335) cornification(GO:0070268)
0.0	0.1	GO:0051970	negative regulation of transmission of nerve impulse(GO:0051970)
0.0	0.2	GO:0021707	cerebellar granular layer formation(GO:0021684) cerebellar granule cell differentiation(GO:0021707)
0.0	0.1	GO:0006114	glycerol biosynthetic process(GO:0006114)
0.0	0.0	GO:0018199	peptidyl-glutamine modification(GO:0018199)
0.0	0.0	GO:0060392	negative regulation of SMAD protein import into nucleus(GO:0060392)
0.0	0.0	GO:0036414	protein citrullination(GO:0018101) histone citrullination(GO:0036414)
0.0	0.1	GO:0002023	reduction of food intake in response to dietary excess(GO:0002023)
0.0	0.1	GO:0009438	methylglyoxal metabolic process(GO:0009438)
0.0	0.1	GO:2000253	positive regulation of feeding behavior(GO:2000253)
0.0	0.0	GO:0000912	assembly of actomyosin apparatus involved in cytokinesis(GO:0000912) actomyosin contractile ring assembly(GO:0000915) actomyosin contractile ring organization(GO:0044837)
0.0	0.0	GO:0002581	negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II(GO:0002581)
0.0	0.0	GO:0002434	immune complex clearance(GO:0002434)
0.0	0.0	GO:0006574	valine catabolic process(GO:0006574)
0.0	0.0	GO:0071422	succinate transport(GO:0015744) succinate transmembrane transport(GO:0071422)
0.0	0.2	GO:0009642	response to light intensity(GO:0009642)
0.0	0.1	GO:0035404	histone-serine phosphorylation(GO:0035404)
0.0	0.0	GO:1904009	cellular response to monosodium glutamate(GO:1904009)
0.0	0.0	GO:0051867	general adaptation syndrome, behavioral process(GO:0051867)
0.0	0.0	GO:0035928	rRNA import into mitochondrion(GO:0035928)
0.0	0.1	GO:0045627	positive regulation of T-helper 1 cell differentiation(GO:0045627) negative regulation of T-helper 2 cell differentiation(GO:0045629)
0.0	0.1	GO:0060327	cytoplasmic actin-based contraction involved in cell motility(GO:0060327)
0.0	0.1	GO:0072144	glomerular mesangial cell development(GO:0072144)
0.0	0.1	GO:0046116	queuosine biosynthetic process(GO:0008616) queuosine metabolic process(GO:0046116)
0.0	0.1	GO:2001012	mesenchymal cell differentiation involved in kidney development(GO:0072161) mesenchymal cell differentiation involved in renal system development(GO:2001012)
0.0	0.0	GO:0071338	submandibular salivary gland formation(GO:0060661) positive regulation of hair follicle cell proliferation(GO:0071338)
0.0	0.0	GO:0050828	regulation of liquid surface tension(GO:0050828)
0.0	0.0	GO:0033030	negative regulation of neutrophil apoptotic process(GO:0033030)
0.0	0.0	GO:0001560	regulation of cell growth by extracellular stimulus(GO:0001560) phenotypic switching(GO:0036166) negative regulation of beta-amyloid clearance(GO:1900222) positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation(GO:2000721)
0.0	0.1	GO:0036233	glycine import(GO:0036233)
0.0	0.1	GO:2000483	negative regulation of interleukin-8 secretion(GO:2000483)
0.0	0.0	GO:0042222	interleukin-1 biosynthetic process(GO:0042222)
0.0	0.1	GO:1902746	regulation of lens fiber cell differentiation(GO:1902746)
0.0	0.0	GO:0042726	flavin-containing compound metabolic process(GO:0042726)
0.0	0.1	GO:0002943	tRNA dihydrouridine synthesis(GO:0002943)
0.0	0.0	GO:0000966	RNA 5'-end processing(GO:0000966)
0.0	0.2	GO:0006120	mitochondrial electron transport, NADH to ubiquinone(GO:0006120)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0070821	azurophil granule membrane(GO:0035577) tertiary granule membrane(GO:0070821)
0.0	0.4	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)(GO:0045263)
0.0	0.2	GO:0032133	chromosome passenger complex(GO:0032133)
0.0	0.1	GO:0001405	presequence translocase-associated import motor(GO:0001405)
0.0	0.1	GO:0045025	mitochondrial degradosome(GO:0045025)
0.0	0.1	GO:0008282	ATP-sensitive potassium channel complex(GO:0008282)
0.0	0.1	GO:1990726	Lsm1-7-Pat1 complex(GO:1990726)
0.0	0.1	GO:0008541	proteasome regulatory particle, lid subcomplex(GO:0008541)
0.0	0.1	GO:1990716	axonemal central apparatus(GO:1990716)
0.0	0.1	GO:0036156	inner dynein arm(GO:0036156)
0.0	0.1	GO:0032541	cortical endoplasmic reticulum(GO:0032541)
0.0	0.6	GO:0005747	mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.0	0.0	GO:0033185	dolichol-phosphate-mannose synthase complex(GO:0033185)
0.0	0.0	GO:0097453	mesaxon(GO:0097453) ensheathing process(GO:1990015)
0.0	0.1	GO:0045275	respiratory chain complex III(GO:0045275)
0.0	0.0	GO:0097149	centralspindlin complex(GO:0097149)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0004062	aryl sulfotransferase activity(GO:0004062)
0.0	0.1	GO:0015222	serotonin transmembrane transporter activity(GO:0015222)
0.0	0.1	GO:0046573	lactonohydrolase activity(GO:0046573) acyl-L-homoserine-lactone lactonohydrolase activity(GO:0102007)
0.0	0.1	GO:0004982	N-formyl peptide receptor activity(GO:0004982)
0.0	0.1	GO:0019770	IgG receptor activity(GO:0019770)
0.0	0.1	GO:0005294	neutral L-amino acid secondary active transmembrane transporter activity(GO:0005294)
0.0	0.3	GO:0035174	histone serine kinase activity(GO:0035174)
0.0	0.7	GO:0003954	NADH dehydrogenase activity(GO:0003954)
0.0	0.1	GO:0008281	sulfonylurea receptor activity(GO:0008281)
0.0	0.1	GO:0005148	prolactin receptor binding(GO:0005148)
0.0	0.2	GO:0042043	neurexin family protein binding(GO:0042043)
0.0	0.3	GO:0005313	L-glutamate transmembrane transporter activity(GO:0005313)
0.0	0.1	GO:0061133	endopeptidase activator activity(GO:0061133)
0.0	0.0	GO:0070976	TIR domain binding(GO:0070976)
0.0	0.1	GO:0008121	ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.0	0.1	GO:0048030	disaccharide binding(GO:0048030)
0.0	0.0	GO:0004464	leukotriene-C4 synthase activity(GO:0004464)
0.0	0.0	GO:0004668	protein-arginine deiminase activity(GO:0004668)
0.0	0.0	GO:0050294	steroid sulfotransferase activity(GO:0050294)
0.0	0.7	GO:0070888	E-box binding(GO:0070888)
0.0	0.0	GO:0015141	succinate transmembrane transporter activity(GO:0015141)
0.0	0.3	GO:0005549	odorant binding(GO:0005549)
0.0	0.1	GO:0004140	dephospho-CoA kinase activity(GO:0004140)
0.0	0.0	GO:0004582	dolichyl-phosphate beta-D-mannosyltransferase activity(GO:0004582)
0.0	0.1	GO:0008479	queuine tRNA-ribosyltransferase activity(GO:0008479)
0.0	0.1	GO:0016841	ammonia-lyase activity(GO:0016841)
0.0	0.1	GO:0098519	nucleotide phosphatase activity, acting on free nucleotides(GO:0098519)
0.0	0.1	GO:1901611	phosphatidylglycerol binding(GO:1901611) cardiolipin binding(GO:1901612)
0.0	0.1	GO:0017150	tRNA dihydrouridine synthase activity(GO:0017150)
0.0	0.1	GO:0016713	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen(GO:0016713)
0.0	0.0	GO:0016429	tRNA (adenine-N1-)-methyltransferase activity(GO:0016429)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	SA FAS SIGNALING	The TNF-type receptor Fas induces apoptosis on ligand binding.

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.6	REACTOME REGULATION OF GENE EXPRESSION IN BETA CELLS	Genes involved in Regulation of gene expression in beta cells
0.0	0.2	REACTOME HORMONE LIGAND BINDING RECEPTORS	Genes involved in Hormone ligand-binding receptors
0.0	0.3	REACTOME GLUTAMATE NEUROTRANSMITTER RELEASE CYCLE	Genes involved in Glutamate Neurotransmitter Release Cycle
0.0	0.1	REACTOME CYTOSOLIC SULFONATION OF SMALL MOLECULES	Genes involved in Cytosolic sulfonation of small molecules