Project
GSE49485: Hypoxia transcriptome sequencing of rat brain.
Navigation
Downloads
Results for Bcl6
Z-value: 0.47
Motif logo
Transcription factors associated with Bcl6
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| Bcl6 | rn6_v1_chr11_+_80255790_80255790 | 0.89 | 4.2e-02 | Click! |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr7_-_3342491 Show fit | 0.34 |
ENSRNOT00000081756
|
retinol dehydrogenase 5 |
|
| chr3_-_2803574 Show fit | 0.24 |
ENSRNOT00000040995
|
similar to Gene model 996 |
|
| chr5_+_29538380 Show fit | 0.23 |
ENSRNOT00000010845
|
calbindin 1 |
|
| chr7_+_18510354 Show fit | 0.23 |
ENSRNOT00000060002
|
PML-RARA regulated adaptor molecule 1 |
|
| chr16_+_54291251 Show fit | 0.22 |
ENSRNOT00000079006
|
microtubule associated tumor suppressor 1 |
|
| chr19_-_37528011 Show fit | 0.19 |
ENSRNOT00000059628
|
agouti related neuropeptide |
|
| chr5_+_139597731 Show fit | 0.19 |
ENSRNOT00000072427
|
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4 |
|
| chr8_-_80631873 Show fit | 0.16 |
ENSRNOT00000091661
ENSRNOT00000080662 |
unc-13 homolog C |
|
| chr2_-_259150479 Show fit | 0.16 |
ENSRNOT00000085892
|
|
|
| chr16_+_54358471 Show fit | 0.15 |
ENSRNOT00000047314
|
microtubule associated tumor suppressor 1 |
Network of associatons between targets according to the STRING database.
First level regulatory network of Bcl6
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.2 | GO:0035502 | metanephric part of ureteric bud development(GO:0035502) |
| 0.0 | 0.2 | GO:0043313 | regulation of neutrophil degranulation(GO:0043313) |
| 0.0 | 0.2 | GO:2000253 | positive regulation of feeding behavior(GO:2000253) |
| 0.0 | 0.2 | GO:0031914 | negative regulation of synaptic plasticity(GO:0031914) |
| 0.0 | 0.1 | GO:0051933 | amino acid neurotransmitter reuptake(GO:0051933) glutamate reuptake(GO:0051935) |
| 0.0 | 0.1 | GO:0003331 | ovarian follicle rupture(GO:0001543) angiotensin mediated vasoconstriction involved in regulation of systemic arterial blood pressure(GO:0001998) regulation of renal output by angiotensin(GO:0002019) angiotensin-mediated drinking behavior(GO:0003051) regulation of extracellular matrix constituent secretion(GO:0003330) positive regulation of extracellular matrix constituent secretion(GO:0003331) response to muscle activity involved in regulation of muscle adaptation(GO:0014873) positive regulation of gap junction assembly(GO:1903598) |
| 0.0 | 0.1 | GO:0007199 | G-protein coupled receptor signaling pathway coupled to cGMP nucleotide second messenger(GO:0007199) |
| 0.0 | 0.1 | GO:1903999 | negative regulation of eating behavior(GO:1903999) |
| 0.0 | 0.1 | GO:0010510 | regulation of acetyl-CoA biosynthetic process from pyruvate(GO:0010510) |
| 0.0 | 0.1 | GO:0006428 | isoleucyl-tRNA aminoacylation(GO:0006428) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:0044305 | calyx of Held(GO:0044305) |
| 0.0 | 0.2 | GO:0005796 | Golgi lumen(GO:0005796) |
| 0.0 | 0.1 | GO:0070033 | synaptobrevin 2-SNAP-25-syntaxin-1a-complexin II complex(GO:0070033) |
| 0.0 | 0.0 | GO:0097453 | mesaxon(GO:0097453) ensheathing process(GO:1990015) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.3 | GO:0004745 | retinol dehydrogenase activity(GO:0004745) |
| 0.1 | 0.2 | GO:0099510 | calcium ion binding involved in regulation of cytosolic calcium ion concentration(GO:0099510) |
| 0.0 | 0.2 | GO:0019992 | diacylglycerol binding(GO:0019992) |
| 0.0 | 0.1 | GO:0015272 | ATP-activated inward rectifier potassium channel activity(GO:0015272) |
| 0.0 | 0.1 | GO:0019807 | aspartoacylase activity(GO:0019807) |
| 0.0 | 0.1 | GO:2001070 | starch binding(GO:2001070) |
| 0.0 | 0.1 | GO:0004740 | pyruvate dehydrogenase (acetyl-transferring) kinase activity(GO:0004740) |
| 0.0 | 0.1 | GO:0004969 | histamine receptor activity(GO:0004969) |
| 0.0 | 0.1 | GO:0004822 | isoleucine-tRNA ligase activity(GO:0004822) |
| 0.0 | 0.1 | GO:0070290 | N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290) |
Gene overrepresentation in curated gene sets: canonical pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.3 | PID RHODOPSIN PATHWAY | Visual signal transduction: Rods |