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GSE49485: Hypoxia transcriptome sequencing of rat brain.
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Results for Arid5b
Z-value: 0.45
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Transcription factors associated with Arid5b
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr8_-_55696601 Show fit | 0.19 |
ENSRNOT00000016127
|
RGD1562914 |
|
| chr20_+_3558827 Show fit | 0.15 |
ENSRNOT00000088130
|
discoidin domain receptor tyrosine kinase 1 |
|
| chr17_+_45199178 Show fit | 0.15 |
ENSRNOT00000080047
|
zinc finger and SCAN domain containing 26 |
|
| chr1_-_43638161 Show fit | 0.15 |
ENSRNOT00000024460
|
interaction protein for cytohesin exchange factors 1 |
|
| chr20_+_4363508 Show fit | 0.15 |
ENSRNOT00000077205
|
advanced glycosylation end product-specific receptor |
|
| chr2_-_208225888 Show fit | 0.14 |
ENSRNOT00000054860
|
|
|
| chr4_-_11497531 Show fit | 0.13 |
ENSRNOT00000078799
|
membrane associated guanylate kinase, WW and PDZ domain containing 2 |
|
| chr11_+_15081774 Show fit | 0.13 |
ENSRNOT00000009911
|
ubiquitin carboxyl-terminal hydrolase 25-like |
|
| chr18_+_14756684 Show fit | 0.11 |
ENSRNOT00000076085
ENSRNOT00000076129 |
microtubule-associated protein, RP/EB family, member 2 |
|
| chr15_-_39742103 Show fit | 0.09 |
ENSRNOT00000074587
ENSRNOT00000036781 ENSRNOT00000071919 |
SET domain, bifurcated 2 |
Network of associatons between targets according to the STRING database.
First level regulatory network of Arid5b
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:1905204 | response to selenite ion(GO:0072714) negative regulation of connective tissue replacement(GO:1905204) |
| 0.0 | 0.1 | GO:0097118 | neuroligin clustering involved in postsynaptic membrane assembly(GO:0097118) |
| 0.0 | 0.1 | GO:0008050 | female courtship behavior(GO:0008050) |
| 0.0 | 0.1 | GO:0061302 | smooth muscle cell-matrix adhesion(GO:0061302) |
| 0.0 | 0.1 | GO:0038096 | immune response-regulating cell surface receptor signaling pathway involved in phagocytosis(GO:0002433) Fc-gamma receptor signaling pathway involved in phagocytosis(GO:0038096) |
| 0.0 | 0.0 | GO:0072709 | cellular response to sorbitol(GO:0072709) |
| 0.0 | 0.0 | GO:0031959 | mineralocorticoid receptor signaling pathway(GO:0031959) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0061673 | mitotic spindle astral microtubule(GO:0061673) |
| 0.0 | 0.1 | GO:0031088 | platelet dense granule membrane(GO:0031088) |
| 0.0 | 0.1 | GO:0000221 | vacuolar proton-transporting V-type ATPase, V1 domain(GO:0000221) |
| 0.0 | 0.1 | GO:0036057 | filtration diaphragm(GO:0036056) slit diaphragm(GO:0036057) |
| 0.0 | 0.0 | GO:0098855 | HCN channel complex(GO:0098855) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0070699 | type II activin receptor binding(GO:0070699) |
| 0.0 | 0.1 | GO:0050785 | advanced glycation end-product receptor activity(GO:0050785) |
| 0.0 | 0.1 | GO:0038062 | protein tyrosine kinase collagen receptor activity(GO:0038062) |
| 0.0 | 0.1 | GO:0005220 | inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity(GO:0005220) |
| 0.0 | 0.1 | GO:0001642 | group III metabotropic glutamate receptor activity(GO:0001642) |
| 0.0 | 0.1 | GO:0004095 | carnitine O-palmitoyltransferase activity(GO:0004095) O-palmitoyltransferase activity(GO:0016416) |
| 0.0 | 0.1 | GO:0031802 | type 5 metabotropic glutamate receptor binding(GO:0031802) |
| 0.0 | 0.1 | GO:0046974 | histone methyltransferase activity (H3-K9 specific)(GO:0046974) |
| 0.0 | 0.1 | GO:0008553 | hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553) |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | REACTOME ADVANCED GLYCOSYLATION ENDPRODUCT RECEPTOR SIGNALING | Genes involved in Advanced glycosylation endproduct receptor signaling |