GSE49485: Hypoxia transcriptome sequencing of rat brain.
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Ar | rn6_v1_chrX_+_67656253_67656253 | 0.32 | 5.9e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr19_+_27603307 Show fit | 0.98 |
ENSRNOT00000074702
|
|
|
chr15_-_42271443 Show fit | 0.96 |
ENSRNOT00000085508
|
|
|
chr15_+_64939527 Show fit | 0.93 |
ENSRNOT00000045865
|
|
|
chr2_+_89254154 Show fit | 0.90 |
ENSRNOT00000073391
|
|
|
chr3_+_116072294 Show fit | 0.89 |
ENSRNOT00000071786
|
|
|
chr2_-_167607919 Show fit | 0.88 |
ENSRNOT00000089083
|
|
|
chr2_+_52152536 Show fit | 0.87 |
ENSRNOT00000072691
|
|
|
chr19_+_24655626 Show fit | 0.87 |
ENSRNOT00000086690
|
|
|
chr3_-_76012929 Show fit | 0.87 |
ENSRNOT00000085199
|
|
|
chr6_+_54438436 Show fit | 0.86 |
ENSRNOT00000091972
|
|
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 0.7 | GO:0043321 | regulation of natural killer cell degranulation(GO:0043321) |
0.2 | 0.6 | GO:0032197 | transposition, RNA-mediated(GO:0032197) |
0.0 | 0.5 | GO:0031581 | hemidesmosome assembly(GO:0031581) |
0.1 | 0.4 | GO:0021759 | globus pallidus development(GO:0021759) |
0.0 | 0.4 | GO:0019852 | L-ascorbic acid metabolic process(GO:0019852) |
0.0 | 0.4 | GO:0014850 | response to muscle activity(GO:0014850) |
0.1 | 0.3 | GO:1904612 | glucuronoside metabolic process(GO:0019389) response to 2,3,7,8-tetrachlorodibenzodioxine(GO:1904612) |
0.1 | 0.3 | GO:2000721 | positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation(GO:2000721) |
0.1 | 0.3 | GO:0045163 | clustering of voltage-gated potassium channels(GO:0045163) |
0.1 | 0.3 | GO:0099553 | trans-synaptic signaling by lipid, modulating synaptic transmission(GO:0099552) trans-synaptic signaling by endocannabinoid, modulating synaptic transmission(GO:0099553) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.5 | GO:0030056 | hemidesmosome(GO:0030056) |
0.0 | 0.4 | GO:0044232 | organelle membrane contact site(GO:0044232) |
0.0 | 0.4 | GO:0017146 | NMDA selective glutamate receptor complex(GO:0017146) |
0.1 | 0.3 | GO:0061474 | phagolysosome membrane(GO:0061474) |
0.1 | 0.3 | GO:0020005 | symbiont-containing vacuole membrane(GO:0020005) |
0.1 | 0.3 | GO:1990246 | uniplex complex(GO:1990246) |
0.0 | 0.3 | GO:0032591 | dendritic spine membrane(GO:0032591) |
0.0 | 0.3 | GO:0097449 | astrocyte projection(GO:0097449) |
0.1 | 0.2 | GO:0046691 | intracellular canaliculus(GO:0046691) |
0.1 | 0.2 | GO:0042642 | actomyosin, myosin complex part(GO:0042642) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.5 | GO:0030506 | ankyrin binding(GO:0030506) |
0.1 | 0.4 | GO:0016672 | oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor(GO:0016672) oxidoreductase activity, acting on phosphorus or arsenic in donors(GO:0030613) oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor(GO:0030614) glutathione dehydrogenase (ascorbate) activity(GO:0045174) methylarsonate reductase activity(GO:0050610) |
0.0 | 0.4 | GO:0001206 | transcriptional repressor activity, RNA polymerase II distal enhancer sequence-specific binding(GO:0001206) |
0.0 | 0.4 | GO:0001972 | retinoic acid binding(GO:0001972) |
0.1 | 0.3 | GO:0015292 | uniporter activity(GO:0015292) |
0.1 | 0.3 | GO:0099583 | neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration(GO:0099583) |
0.1 | 0.3 | GO:0005250 | A-type (transient outward) potassium channel activity(GO:0005250) |
0.1 | 0.3 | GO:0048030 | disaccharide binding(GO:0048030) |
0.0 | 0.3 | GO:0071532 | GKAP/Homer scaffold activity(GO:0030160) ankyrin repeat binding(GO:0071532) |
0.0 | 0.3 | GO:0008559 | xenobiotic-transporting ATPase activity(GO:0008559) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.3 | PID INTEGRIN CS PATHWAY | Integrin family cell surface interactions |
0.0 | 0.1 | ST STAT3 PATHWAY | STAT3 Pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.6 | REACTOME CASPASE MEDIATED CLEAVAGE OF CYTOSKELETAL PROTEINS | Genes involved in Caspase-mediated cleavage of cytoskeletal proteins |
0.0 | 0.4 | REACTOME GLUTATHIONE CONJUGATION | Genes involved in Glutathione conjugation |
0.0 | 0.3 | REACTOME ABACAVIR TRANSPORT AND METABOLISM | Genes involved in Abacavir transport and metabolism |
0.0 | 0.2 | REACTOME TRANSPORT OF ORGANIC ANIONS | Genes involved in Transport of organic anions |
0.0 | 0.2 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.0 | 0.2 | REACTOME ROLE OF DCC IN REGULATING APOPTOSIS | Genes involved in Role of DCC in regulating apoptosis |
0.0 | 0.2 | REACTOME DOWNREGULATION OF ERBB2 ERBB3 SIGNALING | Genes involved in Downregulation of ERBB2:ERBB3 signaling |
0.0 | 0.2 | REACTOME P130CAS LINKAGE TO MAPK SIGNALING FOR INTEGRINS | Genes involved in p130Cas linkage to MAPK signaling for integrins |
0.0 | 0.2 | REACTOME P38MAPK EVENTS | Genes involved in p38MAPK events |
0.0 | 0.2 | REACTOME TIE2 SIGNALING | Genes involved in Tie2 Signaling |