Project
GSE80451: E.coli grown aerobically and anaerobically
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Results for YedW
Z-value: 0.31
Transcription factors associated with YedW
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
yedW
|
yedW | YedW DNA-binding response regulator in two-component system with YedV |
Activity profile of YedW motif
Sorted Z-values of YedW motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| cusRS | 0.34 |
cusS
cusR
|
CusS sensory histidine kinase CusR transcriptional activator |
|
| cusCFBA | 0.24 |
cusA
cusC
cusB
cusF
|
copper / silver exporter - membrane subunit copper / silver exporter - outer membrane porin copper / silver exporter - membrane fusion protein copper / silver exporter - periplasmic binding protein and metallochaperone |
|
| yedX | 0.22 |
yedX
|
hydroxyisourate hydrolase / transthyretin-related protein |
Network of associatons between targets according to the STRING database.
First level regulatory network of YedW
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.2 | 0.6 | GO:0010272 | response to silver ion(GO:0010272) |
| 0.0 | 0.2 | GO:0006144 | purine nucleobase metabolic process(GO:0006144) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.2 | GO:0016530 | metallochaperone activity(GO:0016530) |
| 0.1 | 0.2 | GO:0016812 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812) |
| 0.0 | 0.3 | GO:0000155 | phosphorelay sensor kinase activity(GO:0000155) protein histidine kinase activity(GO:0004673) |