Project
GSE80451: E.coli grown aerobically and anaerobically
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Results for YdeO
Z-value: 0.62
Transcription factors associated with YdeO
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
ydeO
|
ydeO | YdeO DNA-binding transcriptional dual regulator |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| ydeO | , | 0.89 | 4.1e-02 | Click! |
Activity profile of YdeO motif
Sorted Z-values of YdeO motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| slp-dctR | 1.84 |
slp
dctR
|
starvation lipoprotein predicted DNA-binding transcriptional regulator |
|
| yiiS-uspD | 1.36 |
yiiS
uspD
|
conserved protein stress protein involved in resistance to UV irradiation |
|
| gadW | 0.65 |
gadW
|
GadW DNA-binding transcriptional dual regulator |
|
| gadE | 0.59 |
gadE
|
GadE DNA-binding transcriptional activator |
Network of associatons between targets according to the STRING database.
First level regulatory network of YdeO
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.6 | 1.8 | GO:0031329 | regulation of cellular catabolic process(GO:0031329) regulation of cellular carbohydrate catabolic process(GO:0043471) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 1.6 | GO:0019867 | outer membrane(GO:0019867) |