Project

GSE80451: E.coli grown aerobically and anaerobically

Navigation
Downloads

Results for UxuR

Z-value: 0.40

Transcription factors associated with UxuR

Gene Symbol Gene ID Gene Info
uxuR
uxuR UxuR DNA-binding transcriptional repressor

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
uxuR-0.913.4e-02Click!

Activity profile of UxuR motif

Sorted Z-values of UxuR motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
uxuAB 1.16
uxuA
uxuB
D-mannonate dehydratase
D-mannonate oxidoreductase
lgoR 0.89
lgoR
predicted DNA-binding transcriptional regulator
gntP 0.26
gntP
gluconate / fructuronate transporter GntP
uidABC 0.02
uidB
uidC
uidA
glucuronide:H+ symporter
outer membrane-associated protein
β-D-glucuronidase

Network of associatons between targets according to the STRING database.

First level regulatory network of UxuR

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.
View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.2 GO:0006063 uronic acid metabolic process(GO:0006063)
0.3 0.3 GO:0042873 aldonate transport(GO:0042873)
0.1 0.9 GO:0019520 aldonic acid metabolic process(GO:0019520) aldonic acid catabolic process(GO:0046176)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.2 GO:0008198 ferrous iron binding(GO:0008198)
0.1 0.3 GO:0015128 gluconate transmembrane transporter activity(GO:0015128) aldonate transmembrane transporter activity(GO:0042879)