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GSE80451: E.coli grown aerobically and anaerobically

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Results for TrpR

Z-value: 0.52

Transcription factors associated with TrpR

Gene Symbol Gene ID Gene Info
trpR TrpR transcriptional repressor

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
trpR0.553.4e-01Click!

Activity profile of TrpR motif

Sorted Z-values of TrpR motif

Promoter Log-likelihood Transcript Gene Gene Info
aroL-yaiA-aroM 2.06 predicted protein
shikimate kinase II
conserved protein
mtr 1.72 tryptohan / indole:H+ symporter Mtr
trpL 0.08 trp operon leader peptide

Network of associatons between targets according to the STRING database.

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 1.7 GO:0015827 tryptophan transport(GO:0015827)
0.1 0.8 GO:0009073 aromatic amino acid family biosynthetic process(GO:0009073)
0.0 0.1 GO:0090357 regulation of cellular amino acid metabolic process(GO:0006521) tryptophan metabolic process(GO:0006568) indolalkylamine metabolic process(GO:0006586) regulation of cellular amine metabolic process(GO:0033238) indole-containing compound metabolic process(GO:0042430) regulation of tryptophan metabolic process(GO:0090357)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 1.7 GO:0015196 L-tryptophan transmembrane transporter activity(GO:0015196)
0.0 2.1 GO:0016773 phosphotransferase activity, alcohol group as acceptor(GO:0016773)