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GSE80451: E.coli grown aerobically and anaerobically

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Results for StpA

Z-value: 1.08

Transcription factors associated with StpA

Gene Symbol Gene ID Gene Info
stpA
stpA DNA-binding transcriptional repressor StpA with RNA chaperone activity

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
stpA0.721.7e-01Click!

Activity profile of StpA motif

Sorted Z-values of StpA motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
ssrS 5.06
ssrS
6S RNA
ssrS-fau 4.71
ssrS
fau
6S RNA
5-formyltetrahydrofolate cyclo-ligase
stpA 1.98
stpA
H-NS-like DNA-binding transcriptional repressor with RNA chaperone activity

Network of associatons between targets according to the STRING database.

First level regulatory network of StpA

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.6 4.7 GO:0035999 tetrahydrofolate interconversion(GO:0035999)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.2 4.7 GO:0016882 cyclo-ligase activity(GO:0016882)
0.0 2.0 GO:0003677 DNA binding(GO:0003677)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.6 4.7 REACTOME TRANSLATION Genes involved in Translation