Project
GSE80451: E.coli grown aerobically and anaerobically
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Results for Sigma19
Z-value: 0.11
Transcription factors associated with Sigma19
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
fecI
|
fecI | RNA polymerase sigma factor FecI |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| fecI | -0.70 | 1.9e-01 | Click! |
Activity profile of Sigma19 motif
Sorted Z-values of Sigma19 motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| fecABCDE | 0.10 |
fecD
fecE
fecB
fecC
fecA
|
ferric citrate ABC transporter - membrane subunit ferric citrate ABC transporter - ATP binding subunit ferric citrate ABC transporter - periplasmic binding protein ferric citrate ABC transporter - membrane subunit ferric citrate outer membrane porin FecA |
Network of associatons between targets according to the STRING database.
First level regulatory network of Sigma19
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0015682 | ferric iron transport(GO:0015682) trivalent inorganic cation transport(GO:0072512) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0015603 | iron chelate transmembrane transporter activity(GO:0015603) |