Project
GSE80451: E.coli grown aerobically and anaerobically
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Results for PuuR
Z-value: 0.53
Transcription factors associated with PuuR
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
puuR
|
puuR | PuuR DNA-binding transcriptional repressor |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| puuR | -0.82 | 8.8e-02 | Click! |
Activity profile of PuuR motif
Sorted Z-values of PuuR motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| puuAP | 2.14 |
puuP
puuA
|
putrescine:H+ symporter PuuP glutamate-putrescine ligase |
|
| puuDRCBE | 0.51 |
puuR
puuC
puuB
puuD
puuE
|
PuuR DNA-binding transcriptional repressor γ-glutamyl-γ-aminobutyraldehyde dehydrogenase γ-glutamylputrescine oxidase γ-glutamyl-γ-aminobutyrate hydrolase 4-aminobutyrate aminotransferase |
Network of associatons between targets according to the STRING database.
First level regulatory network of PuuR
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.7 | 2.1 | GO:0015846 | polyamine transport(GO:0015846) putrescine transport(GO:0015847) |
| 0.1 | 0.5 | GO:0006598 | polyamine catabolic process(GO:0006598) putrescine catabolic process(GO:0009447) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.4 | 2.1 | GO:0015101 | organic cation transmembrane transporter activity(GO:0015101) acid-ammonia (or amide) ligase activity(GO:0016880) |
| 0.1 | 0.5 | GO:0003867 | 4-aminobutyrate transaminase activity(GO:0003867) |