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GSE80451: E.coli grown aerobically and anaerobically

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Results for NimR

Z-value: 0.47

Transcription factors associated with NimR

Gene Symbol Gene ID Gene Info
nimR
nimR NimR DNA-binding transcriptional repressor

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
nimR0.801.0e-01Click!

Activity profile of NimR motif

Sorted Z-values of NimR motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
nimT 1.20
nimT
drug (nitroimidazole) efflux pump
nimR 0.84
nimR
NimR DNA-binding transcriptional repressor

Network of associatons between targets according to the STRING database.

First level regulatory network of NimR

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 1.2 GO:0046677 response to antibiotic(GO:0046677)
0.0 0.8 GO:1902679 negative regulation of transcription, DNA-templated(GO:0045892) negative regulation of RNA biosynthetic process(GO:1902679) negative regulation of nucleic acid-templated transcription(GO:1903507)