Project
GSE80451: E.coli grown aerobically and anaerobically
Navigation
Downloads
Results for NikR
Z-value: 0.09
Transcription factors associated with NikR
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
nikR
|
nikR | NikR DNA-binding transcriptional repressor, Ni-binding |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| nikR | 0.63 | 2.6e-01 | Click! |
Activity profile of NikR motif
Sorted Z-values of NikR motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| nikABCDER | 0.07 |
nikB
nikC
nikA
nikD
nikE
nikR
|
nickel ABC transporter - membrane subunit nickel ABC transporter - membrane subunit nickel ABC transporter - periplasmic binding protein nickel ABC transporter - ATP binding subunit nickel ABC transporter - ATP binding subunit NikR DNA-binding transcriptional repressor, Ni-binding |
Network of associatons between targets according to the STRING database.
First level regulatory network of NikR
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0006935 | chemotaxis(GO:0006935) taxis(GO:0042330) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0015099 | nickel cation transmembrane transporter activity(GO:0015099) |