Project

GSE80451: E.coli grown aerobically and anaerobically

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Results for NanR

Z-value: 1.23

Transcription factors associated with NanR

Gene Symbol Gene ID Gene Info
nanR NanR DNA-binding transcriptional dual regulator

Activity profile of NanR motif

Sorted Z-values of NanR motif

Promoter Log-likelihood Transcript Gene Gene Info
nanA 5.43 N-acetylneuraminate lyase
nanCM 5.02 N-acetylneuraminic acid outer membrane channel
N-acetylneuraminate mutarotase
nanCMS 4.20 N-acetylneuraminic acid outer membrane channel
N-acetylneuraminate mutarotase
probable 9-O-acetyl-N-acetylneuraminate esterase
nanATEK-yhcH 0.87 N-acetylneuraminate lyase
N-acetylmannosamine kinase
predicted N-acetylmannosamine-6-phosphate epimerase
N-acetylneuraminate:H+ symporter
conserved protein

Network of associatons between targets according to the STRING database.

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.6 6.3 GO:0006054 N-acetylneuraminate metabolic process(GO:0006054) N-acetylneuraminate catabolic process(GO:0019262)
0.8 9.2 GO:0015772 oligosaccharide transport(GO:0015772)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.2 9.2 GO:0045203 integral component of cell outer membrane(GO:0045203)
0.0 6.3 GO:0005829 cytosol(GO:0005829)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
3.4 10.1 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.7 5.4 GO:0016833 oxo-acid-lyase activity(GO:0016833)