Project

GSE80451: E.coli grown aerobically and anaerobically

Navigation
Downloads

Results for Nac

Z-value: 0.65

Transcription factors associated with Nac

Gene Symbol Gene ID Gene Info
nac
nac Nac DNA-binding transcriptional dual regulator

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
nac-0.098.8e-01Click!

Activity profile of Nac motif

Sorted Z-values of Nac motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
gdhA 2.31
gdhA
glutamate dehydrogenase
gabDTP 1.00
gabD
gabT
gabP
succinate-semialdehyde dehydrogenase (NADP+)
4-aminobutyrate aminotransferase
4-aminobutyrate:H+ symporter
gltBDF 0.91
gltB
gltD
gltF
glutamate synthase, large subunit
glutamate synthase, small subunit
periplasmic protein
serA 0.71

codBA 0.65
codB
codA
cytosine transporter
cytosine deaminase
asnC-mioC-mnmG 0.47
mioC
mnmG
asnC
flavoprotein involved in biotin synthesis
protein involved in modification of U34 in tRNA
AsnC DNA-binding transcriptional dual regulator
asnC-mioC 0.20
mioC
asnC
flavoprotein involved in biotin synthesis
AsnC DNA-binding transcriptional dual regulator
nac 0.12
nac
Nac DNA-binding transcriptional dual regulator

Network of associatons between targets according to the STRING database.

First level regulatory network of Nac

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.
View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 4.2 GO:0009084 glutamine family amino acid biosynthetic process(GO:0009084)
0.2 0.6 GO:0006208 pyrimidine nucleobase catabolic process(GO:0006208) pyrimidine nucleobase transport(GO:0015855)
0.2 0.5 GO:0002098 tRNA wobble uridine modification(GO:0002098)
0.0 0.2 GO:0009102 biotin metabolic process(GO:0006768) biotin biosynthetic process(GO:0009102)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 3.2 GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors(GO:0016638)
0.3 1.0 GO:0004777 succinate-semialdehyde dehydrogenase (NAD+) activity(GO:0004777)
0.2 0.6 GO:0005350 pyrimidine nucleobase transmembrane transporter activity(GO:0005350)
0.0 0.7 GO:0010181 FMN binding(GO:0010181)