GSE80451: E.coli grown aerobically and anaerobically

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
metR Links RegulonDB EcoCyc	metR	MetR DNA-binding transcriptional dual regulator

Gene	Promoter	Pearson corr. coef.	P-value	Plot
metR		0.90	3.5e-02	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
glyA Show fit	3.08		glyA Links RegulonDB EcoCyc Show fit	serine hydroxymethyltransferase
metH Show fit	2.70		metH Links RegulonDB EcoCyc Show fit	cobalamin-dependent methionine synthase
metR Show fit	2.38		metR Links RegulonDB EcoCyc Show fit	MetR DNA-binding transcriptional dual regulator
hmp Show fit	1.48		hmp Links RegulonDB EcoCyc Show fit	nitric oxide dioxygenase

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
1.0	3.1	GO:0006565	L-serine catabolic process(GO:0006565)
0.7	2.0	GO:0035999	tetrahydrofolate interconversion(GO:0035999)
0.5	1.5	GO:0046210	nitric oxide metabolic process(GO:0046209) nitric oxide catabolic process(GO:0046210)
0.0	2.4	GO:2001141	regulation of transcription, DNA-templated(GO:0006355) regulation of nucleic acid-templated transcription(GO:1903506) regulation of RNA biosynthetic process(GO:2001141)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	6.5	GO:0005622	intracellular(GO:0005622)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.6	3.1	GO:0016742	hydroxymethyl-, formyl- and related transferase activity(GO:0016742)
0.5	2.0	GO:0008172	S-methyltransferase activity(GO:0008172)
0.4	1.5	GO:0032843	hydroperoxide reductase activity(GO:0032843) dioxygenase activity(GO:0051213)
0.2	2.4	GO:0016597	amino acid binding(GO:0016597)