Project
GSE80451: E.coli grown aerobically and anaerobically
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Results for HipB
Z-value: 0.18
Transcription factors associated with HipB
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
hipB
|
hipB | HipB antitoxin and DNA-binding transcriptional repressor |
Activity-expression correlation:
Activity profile of HipB motif
Sorted Z-values of HipB motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| relA-mazEF | 0.31 |
mazE
relA
mazF
|
MazE antitoxin of the MazF-MazE toxin-antitoxin system GDP pyrophosphokinase/GTP pyrophosphokinase MazF toxin of the MazF-MazE toxin-antitoxin system that exhibits ribonuclease activity |
|
| fadH | 0.05 |
fadH
|
2,4-dienoyl-CoA reductase |
Network of associatons between targets according to the STRING database.
First level regulatory network of HipB
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.3 | GO:0034035 | guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035) ncRNA catabolic process(GO:0034661) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.3 | GO:0005618 | cell wall(GO:0005618) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.3 | GO:0008893 | GTP diphosphokinase activity(GO:0008728) guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity(GO:0008893) diphosphoric monoester hydrolase activity(GO:0016794) |
Gene overrepresentation in curated gene sets: canonical pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.3 | PID ANGIOPOIETIN RECEPTOR PATHWAY | Angiopoietin receptor Tie2-mediated signaling |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.3 | REACTOME DEVELOPMENTAL BIOLOGY | Genes involved in Developmental Biology |