Project

GSE80451: E.coli grown aerobically and anaerobically

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Results for HdfR

Z-value: 0.44

Transcription factors associated with HdfR

Gene Symbol Gene ID Gene Info
hdfR HdfR DNA-binding transcriptional dual regulator

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
hdfR-0.385.3e-01Click!

Activity profile of HdfR motif

Sorted Z-values of HdfR motif

Promoter Log-likelihood Transcript Gene Gene Info
flhDC 1.07 FlhC transcriptional dual regulator
FlhD transcriptional dual regulator
gltBDF 0.78 glutamate synthase, large subunit
glutamate synthase, small subunit
periplasmic protein

Network of associatons between targets according to the STRING database.

First level regulatory network of HdfR

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.8 GO:0019676 ammonia assimilation cycle(GO:0019676)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.8 GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors(GO:0016638)