Project
GSE80451: E.coli grown aerobically and anaerobically
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Results for GlpR
Z-value: 0.94
Transcription factors associated with GlpR
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
glpR
|
glpR | GlpR DNA-binding transcriptional repressor |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| glpR | -0.75 | 1.4e-01 | Click! |
Activity profile of GlpR motif
Sorted Z-values of GlpR motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| glpABC | 4.92 |
glpA
glpC
glpB
|
anaerobic glycerol-3-phosphate dehydrogenase subunit A anaerobic glycerol-3-phosphate dehydrogenase subunit C anaerobic glycerol-3-phosphate dehydrogenase subunit B |
|
| glpTQ | 3.08 |
glpT
glpQ
|
glycerol-3-phosphate:phosphate antiporter glycerophosphoryl diester phosphodiesterase, periplasmic |
Network of associatons between targets according to the STRING database.
First level regulatory network of GlpR
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.8 | 3.1 | GO:0015748 | organophosphate ester transport(GO:0015748) |
| 0.4 | 4.9 | GO:0022900 | electron transport chain(GO:0022900) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.2 | 4.6 | GO:1990204 | oxidoreductase complex(GO:1990204) |
| 0.0 | 3.1 | GO:0042597 | periplasmic space(GO:0042597) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 1.5 | 4.6 | GO:0016901 | oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor(GO:0016901) |
| 1.0 | 3.0 | GO:0015166 | polyol transmembrane transporter activity(GO:0015166) |