GSE80451: E.coli grown aerobically and anaerobically

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
gadE Links RegulonDB EcoCyc	gadE	GadE DNA-binding transcriptional activator

Gene	Promoter	Pearson corr. coef.	P-value	Plot
gadE		0.73	1.6e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
slp-dctR Show fit	2.16		slp Links RegulonDB EcoCyc Show fit dctR Links RegulonDB EcoCyc Show fit	starvation lipoprotein predicted DNA-binding transcriptional regulator
yhiM Show fit	0.80		yhiM Links RegulonDB EcoCyc Show fit	inner membrane protein with a role in acid resistance
adiC Show fit	0.40		adiC Links RegulonDB EcoCyc Show fit	AdiC arginine:agmatine antiporter
aslB Show fit	0.27		aslB Links RegulonDB EcoCyc Show fit	predicted anaerobic sulfatase maturation enzyme
cadBA Show fit	0.13		cadA Links RegulonDB EcoCyc Show fit cadB Links RegulonDB EcoCyc Show fit	lysine decarboxylase 1 lysine:cadaverine antiporter

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.7	2.2	GO:0031329	regulation of cellular catabolic process(GO:0031329) regulation of cellular carbohydrate catabolic process(GO:0043471)
0.2	0.8	GO:0071229	cellular response to acid chemical(GO:0071229)
0.1	0.3	GO:0045852	pH elevation(GO:0045852) intracellular pH elevation(GO:0051454)
0.0	0.1	GO:1903401	organic cation transport(GO:0015695) L-lysine transmembrane transport(GO:1903401)
0.0	0.3	GO:0051604	protein maturation(GO:0051604)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	2.2	GO:0019867	outer membrane(GO:0019867)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.4	GO:0015181	arginine transmembrane transporter activity(GO:0015181)
0.1	0.1	GO:0015189	L-lysine transmembrane transporter activity(GO:0015189)
0.0	2.2	GO:0042802	identical protein binding(GO:0042802)