ISMARA results: FucR

Project

GSE80451: E.coli grown aerobically and anaerobically

Navigation

Downloads

Results for FucR

Z-value: 0.30

Transcription factors associated with FucR

Gene Symbol	Gene ID	Gene Info
fucR RegulonDB EcoCyc	fucR	FucR transcriptional activator

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
fucR		0.86	5.8e-02	Click!

Activity profile of FucR motif

Sorted Z-values of FucR motif

Top targets:

Search:

Show entries

Promoter	Log-likelihood	Transcript	Gene	Gene Info
fucPIKUR Show fit	0.58		fucU RegulonDB EcoCyc Show fit fucR RegulonDB EcoCyc Show fit fucK RegulonDB EcoCyc Show fit fucP RegulonDB EcoCyc Show fit fucI RegulonDB EcoCyc Show fit	L-fucose mutarotase FucR transcriptional activator L-fuculokinase fucose:H+ symporter L-fucose isomerase
fucAO Show fit	0.31		fucO RegulonDB EcoCyc Show fit fucA RegulonDB EcoCyc Show fit	L-1,2-propanediol oxidoreductase L-fuculose-phosphate aldolase

Showing 1 to 2 of 2 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of FucR

View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Search:

Show entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.2	0.9	GO:0006004	fucose metabolic process(GO:0006004) fucose catabolic process(GO:0019317) arabinose metabolic process(GO:0019566) arabinose catabolic process(GO:0019568) L-fucose metabolic process(GO:0042354) L-fucose catabolic process(GO:0042355)

Showing 1 to 1 of 1 entries

Gene overrepresentation in molecular function category:

Search:

Show entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.2	0.6	GO:0015150	fucose transmembrane transporter activity(GO:0015150)
0.0	0.3	GO:0016832	aldehyde-lyase activity(GO:0016832)

Showing 1 to 2 of 2 entries