Project
GSE80451: E.coli grown aerobically and anaerobically
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Results for ComR
Z-value: 0.76
Transcription factors associated with ComR
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
comR
|
comR | ComR DNA-binding transcriptional repressor |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| comR | -0.95 | 1.5e-02 | Click! |
Activity profile of ComR motif
Sorted Z-values of ComR motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| bhsA | 5.60 |
bhsA
|
outer membrane protein involved in copper permeability, stress resistance and biofilm formation |
Network of associatons between targets according to the STRING database.
First level regulatory network of ComR
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.6 | 5.6 | GO:0046688 | response to copper ion(GO:0046688) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 5.6 | GO:0009279 | cell outer membrane(GO:0009279) |