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GSE80451: E.coli grown aerobically and anaerobically

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Results for BetI

Z-value: 0.35

Transcription factors associated with BetI

Gene Symbol Gene ID Gene Info
betI
betI BetI DNA-binding transcriptional repressor

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
betI0.976.9e-03Click!

Activity profile of BetI motif

Sorted Z-values of BetI motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
betIBA 0.65
betB
betI
betA
betaine aldehyde dehydrogenase
BetI DNA-binding transcriptional repressor
choline dehydrogenase
betT 0.47
betT
choline:H+ symporter

Network of associatons between targets according to the STRING database.

First level regulatory network of BetI

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.7 GO:0006577 amino-acid betaine metabolic process(GO:0006577)
0.1 0.5 GO:0015696 ammonium transport(GO:0015696)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.7 GO:0004029 aldehyde dehydrogenase (NAD) activity(GO:0004029)
0.1 0.5 GO:0008519 ammonium transmembrane transporter activity(GO:0008519) alcohol transmembrane transporter activity(GO:0015665)