ISMARA results: BasR

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GSE80451: E.coli grown aerobically and anaerobically

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Results for BasR

Gene Symbol	Gene ID	Gene Info
basR RegulonDB EcoCyc	basR	BasR transcriptional regulator

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Promoter	Log-likelihood	Gene	Gene Info
fimB Show fit	0.19	fimB RegulonDB EcoCyc Show fit	regulator for fimA
csgDEFG Show fit	0.14	csgG RegulonDB EcoCyc Show fit csgF RegulonDB EcoCyc Show fit csgE RegulonDB EcoCyc Show fit csgD RegulonDB EcoCyc Show fit	curli secretion channel curli assembly component curli transport specificity factor CsgD DNA-binding transcriptional dual regulator
qseBC Show fit	0.10	qseC RegulonDB EcoCyc Show fit qseB RegulonDB EcoCyc Show fit	QseC sensory histidine kinase QseB transcriptional activator
dgkA Show fit	0.09	dgkA RegulonDB EcoCyc Show fit	diacylglycerol kinase
cspI Show fit	0.06	cspI RegulonDB EcoCyc Show fit	Qin prophage; cold shock protein

Showing 1 to 5 of 5 entries

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Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.2	GO:0015074	DNA integration(GO:0015074)
0.0	0.1	GO:1900190	regulation of multi-organism process(GO:0043900) regulation of single-species biofilm formation(GO:1900190)
0.0	0.1	GO:0046486	glycerophospholipid metabolic process(GO:0006650) glycerolipid biosynthetic process(GO:0045017) glycerophospholipid biosynthetic process(GO:0046474) glycerolipid metabolic process(GO:0046486)

Showing 1 to 3 of 3 entries

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0031246	intrinsic component of periplasmic side of cell outer membrane(GO:0031246)

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	REACTOME PLATELET ACTIVATION SIGNALING AND AGGREGATION	Genes involved in Platelet activation, signaling and aggregation

Showing 1 to 1 of 1 entries