Project

GSE80451: E.coli grown aerobically and anaerobically

Navigation
Downloads

Results for ArgP

Z-value: 0.89

Transcription factors associated with ArgP

Gene Symbol Gene ID Gene Info
argP ArgP transcriptional activator

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
argP0.997.8e-04Click!

Activity profile of ArgP motif

Sorted Z-values of ArgP motif

Promoter Log-likelihood Transcript Gene Gene Info
lysC 3.40 aspartate kinase III
gdhA 3.39 glutamate dehydrogenase
argP 1.54 ArgP transcriptional activator
dapB 0.48 4-hydroxy-tetrahydrodipicolinate reductase
dapD 0.30 tetrahydrodipicolinate succinylase
nrdAB-yfaE 0.01 ribonucleoside diphosphate reductase 1, α subunit
ribonucleoside diphosphate reductase 1, β subunit, ferritin-like
2Fe-2S cluster-containing protein involved in diferric-tyrosyl radical cofactor maintenance

Network of associatons between targets according to the STRING database.

First level regulatory network of ArgP

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.


View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 3.4 GO:0009092 homoserine biosynthetic process(GO:0009090) homoserine metabolic process(GO:0009092)
0.5 1.5 GO:2000104 regulation of DNA-dependent DNA replication initiation(GO:0030174) negative regulation of DNA-dependent DNA replication(GO:2000104)
0.4 4.2 GO:0043650 dicarboxylic acid biosynthetic process(GO:0043650)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 7.3 GO:0005829 cytosol(GO:0005829)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 3.4 GO:0019202 aspartate kinase activity(GO:0004072) amino acid kinase activity(GO:0019202)
0.6 3.4 GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors(GO:0016638)
0.2 1.5 GO:0003681 bent DNA binding(GO:0003681)
0.1 0.3 GO:0016748 succinyltransferase activity(GO:0016748)
0.0 0.5 GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor(GO:0016628)