GSE80451: E.coli grown aerobically and anaerobically

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
argP Links RegulonDB EcoCyc	argP	ArgP transcriptional activator

Gene	Promoter	Pearson corr. coef.	P-value	Plot
argP		0.99	7.8e-04	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
lysC Show fit	3.40		lysC Links RegulonDB EcoCyc Show fit	aspartate kinase III
gdhA Show fit	3.39		gdhA Links RegulonDB EcoCyc Show fit	glutamate dehydrogenase
argP Show fit	1.54		argP Links RegulonDB EcoCyc Show fit	ArgP transcriptional activator
dapB Show fit	0.48		dapB Links RegulonDB EcoCyc Show fit	4-hydroxy-tetrahydrodipicolinate reductase
dapD Show fit	0.30		dapD Links RegulonDB EcoCyc Show fit	tetrahydrodipicolinate succinylase
nrdAB-yfaE Show fit	0.01		nrdA Links RegulonDB EcoCyc Show fit nrdB Links RegulonDB EcoCyc Show fit yfaE Links RegulonDB EcoCyc Show fit	ribonucleoside diphosphate reductase 1, α subunit ribonucleoside diphosphate reductase 1, β subunit, ferritin-like 2Fe-2S cluster-containing protein involved in diferric-tyrosyl radical cofactor maintenance

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
1.1	3.4	GO:0009092	homoserine biosynthetic process(GO:0009090) homoserine metabolic process(GO:0009092)
0.5	1.5	GO:2000104	regulation of DNA-dependent DNA replication initiation(GO:0030174) negative regulation of DNA-dependent DNA replication(GO:2000104)
0.4	4.2	GO:0043650	dicarboxylic acid biosynthetic process(GO:0043650)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	7.3	GO:0005829	cytosol(GO:0005829)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
1.1	3.4	GO:0019202	aspartate kinase activity(GO:0004072) amino acid kinase activity(GO:0019202)
0.6	3.4	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors(GO:0016638)
0.2	1.5	GO:0003681	bent DNA binding(GO:0003681)
0.1	0.3	GO:0016748	succinyltransferase activity(GO:0016748)
0.0	0.5	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor(GO:0016628)