GSE80451: E.coli grown aerobically and anaerobically

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
allR Links RegulonDB EcoCyc	allR	AllR DNA-binding transcriptional repressor

Promoter	Log-likelihood	Transcript	Gene	Gene Info
allA Show fit	8.51		allA Links RegulonDB EcoCyc Show fit	ureidoglycolate lyase
allS Show fit	6.33		allS Links RegulonDB EcoCyc Show fit	AllS transcriptional activator
gcl-hyi-glxR-ybbW-allB-ybbY-glxK Show fit	1.35		allB Links RegulonDB EcoCyc Show fit glxK Links RegulonDB EcoCyc Show fit hyi Links RegulonDB EcoCyc Show fit gcl Links RegulonDB EcoCyc Show fit glxR Links RegulonDB EcoCyc Show fit ybbY Links RegulonDB EcoCyc Show fit ybbW Links RegulonDB EcoCyc Show fit	allantoinase glycerate kinase II hydroxypyruvate isomerase glyoxylate carboligase tartronate semialdehyde reductase 2 putative transport protein, nucleobase:cation symporter-2 (NCS2) family putative transporter, nucleobase:cation symporter-1 (NCS1) family

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.4	1.3	GO:0006145	purine nucleobase catabolic process(GO:0006145)
0.1	6.3	GO:1903508	positive regulation of transcription, DNA-templated(GO:0045893) positive regulation of RNA metabolic process(GO:0051254) positive regulation of RNA biosynthetic process(GO:1902680) positive regulation of nucleic acid-templated transcription(GO:1903508)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
2.8	8.5	GO:0016842	amidine-lyase activity(GO:0016842)
0.3	1.3	GO:0016812	nucleobase transmembrane transporter activity(GO:0015205) oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor(GO:0016662) hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812)
0.1	6.3	GO:0043565	sequence-specific DNA binding(GO:0043565)