GSE67402: E.coli regulatory changes under long-term starvation
| WM name | Z-value | Associated genes | Logo |
|---|---|---|---|
| GlpR | 4.348 |
|
|
| H-NS | 3.771 |
|
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| Sigma54 | 3.087 |
|
|
| NanR | 3.055 |
|
|
| LexA | 3.021 |
|
|
| NsrR | 2.805 |
|
|
| Sigma38 | 2.772 |
|
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| AraC | 2.507 |
|
|
| CpxR | 2.194 |
|
|
| Fis | 2.003 |
|
|
| PspF | 1.894 |
|
|
| DinJ-YafQ | 1.666 |
|
|
| ComR | 1.648 |
|
|
| Sigma28 | 1.628 |
|
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| ExuR | 1.593 |
|
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| UxuR | 1.529 |
|
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| DcuR | 1.421 |
|
|
| RcdA | 1.414 |
|
|
| NarP | 1.413 |
|
|
| YjjQ | 1.335 |
|
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| ZraR | 1.309 |
|
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| CRP | 1.308 |
|
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| ArgR | 1.251 |
|
|
| AgaR | 1.203 |
|
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| YdeO | 1.180 |
|
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| PhoB | 1.179 |
|
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| BaeR | 1.124 |
|
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| MntR | 1.004 |
|
|
| TorR | 0.971 |
|
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| CecR | 0.966 |
|
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| RutR | 0.960 |
|
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| AllR | 0.945 |
|
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| CaiF | 0.882 |
|
|
| MqsA | 0.879 |
|
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| FucR | 0.831 |
|
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| CadC | 0.806 |
|
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| XylR | 0.803 |
|
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| GlcC | 0.793 |
|
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| RcsB-BglJ | 0.789 |
|
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| RhaS | 0.786 |
|
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| DicA | 0.737 |
|
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| IdnR | 0.721 |
|
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| MelR | 0.717 |
|
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| SgrR | 0.715 |
|
|
| NarL | 0.711 |
|
|
| PgrR | 0.692 |
|
|
| EvgA | 0.691 |
|
|
| LsrR | 0.686 |
|
|
| BolA | 0.671 |
|
|
| OxyR | 0.664 |
|
|
| CynR | 0.660 |
|
|
| Mlc | 0.637 |
|
|
| NorR | 0.631 |
|
|
| MarA | 0.620 |
|
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| Dan | 0.613 |
|
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| MtlR | 0.567 |
|
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| AidB | 0.558 |
|
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| UlaR | 0.549 |
|
|
| UidR | 0.535 |
|
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| RcsB | 0.521 |
|
|
| Ada | 0.518 |
|
|
| NimR | 0.514 |
|
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| YpdB | 0.506 |
|
|
| YqhC | 0.469 |
|
|
| TdcA | 0.461 |
|
|
| AllS | 0.454 |
|
|
| FeaR | 0.450 |
|
|
| MhpR | 0.436 |
|
|
| StpA | 0.434 |
|
|
| MngR | 0.430 |
|
|
| ArsR | 0.427 |
|
|
| GlrR | 0.407 |
|
|
| NemR | 0.390 |
|
|
| DsdC | 0.390 |
|
|
| LrhA | 0.362 |
|
|
| NhaR | 0.360 |
|
|
| LysR | 0.356 |
|
|
| GatR | 0.351 |
|
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| PaaX | 0.335 |
|
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| MarR | 0.319 |
|
|
| HipB | 0.306 |
|
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| EbgR | 0.306 |
|
|
| SoxR | 0.300 |
|
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| YeiL | 0.287 |
|
|
| ArcA | 0.285 |
|
|
| RclR | 0.276 |
|
|
| BluR | 0.265 |
|
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| PrpR | 0.254 |
|
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| UhpA | 0.253 |
|
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| XapR | 0.252 |
|
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| AppY | 0.239 |
|
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| GalS | 0.228 |
|
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| GalR | 0.228 |
|
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| BetI | 0.220 |
|
|
| RcsAB | 0.212 |
|
|
| Sigma32 | 0.210 |
|
|
| RtcR | 0.203 |
|
|
| FadR | 0.184 |
|
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| MalI | 0.175 |
|
|
| LacI | 0.171 |
|
|
| GadX | 0.170 |
|
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| HyfR | 0.160 |
|
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| YiaJ | 0.156 |
|
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| ChbR | 0.155 |
|
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| KdpE | 0.153 |
|
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| BasR | 0.139 |
|
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| BirA | 0.133 |
|
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| TreR | 0.132 |
|
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| AsnC | 0.122 |
|
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| PutA | 0.113 |
|
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| RstA | 0.104 |
|
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| HipAB | 0.101 |
|
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| IscR | 0.093 |
|
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| GutM | 0.093 |
|
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| RhaR | 0.088 |
|
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| FliZ | 0.073 |
|
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| McbR | 0.069 |
|
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| IHF | 0.066 |
|
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| CdaR | 0.051 |
|
|
| Cbl | 0.045 |
|
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| CsgD | 0.023 |
|
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| NikR | 0.022 |
|
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| DeoR | 0.012 |
|
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| MetR | 0.004 |
|
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| AtoC | -0.004 |
|
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| ZntR | -0.005 |
|
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| RelB | -0.011 |
|
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| AdiY | -0.022 |
|
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| SlyA | -0.052 |
|
|
| AscG | -0.056 |
|
|
| YqjI | -0.068 |
|
|
| GadE-RcsB | -0.073 |
|
|
| AlsR | -0.085 |
|
|
| PepA | -0.091 |
|
|
| HcaR | -0.102 |
|
|
| TyrR | -0.104 |
|
|
| UvrY | -0.107 |
|
|
| FabR | -0.116 |
|
|
| NadR | -0.119 |
|
|
| RbsR | -0.147 |
|
|
| SutR | -0.169 |
|
|
| AcrR | -0.198 |
|
|
| LeuO | -0.216 |
|
|
| EnvR | -0.230 |
|
|
| PdhR | -0.231 |
|
|
| LldR | -0.243 |
|
|
| MurR | -0.251 |
|
|
| CsiR | -0.273 |
|
|
| QseB | -0.322 |
|
|
| MraZ | -0.339 |
|
|
| MazE-MazF | -0.389 |
|
|
| MazE | -0.389 |
|
|
| Lrp | -0.404 |
|
|
| NrdR | -0.414 |
|
|
| YehT | -0.442 |
|
|
| OmpR | -0.443 |
|
|
| IclR | -0.447 |
|
|
| Rob | -0.448 |
|
|
| GcvA | -0.456 |
|
|
| DhaR | -0.486 |
|
|
| DnaA | -0.490 |
|
|
| AccB | -0.491 |
|
|
| ModE | -0.501 |
|
|
| DpiA | -0.504 |
|
|
| MatA | -0.506 |
|
|
| GadW | -0.509 |
|
|
| AlaS | -0.511 |
|
|
| Fur | -0.512 |
|
|
| CspA | -0.520 |
|
|
| IlvY | -0.523 |
|
|
| CreB | -0.524 |
|
|
| Sigma19 | -0.579 |
|
|
| KdgR | -0.612 |
|
|
| SdiA | -0.617 |
|
|
| GntR | -0.634 |
|
|
| HU | -0.638 |
|
|
| MprA | -0.670 |
|
|
| Sigma24 | -0.682 |
|
|
| Zur | -0.708 |
|
|
| EnvY | -0.713 |
|
|
| FhlA | -0.749 |
|
|
| PhoP | -0.774 |
|
|
| CusR | -0.821 |
|
|
| YedW | -0.821 |
|
|
| FNR | -0.846 |
|
|
| CytR | -0.961 |
|
|
| HdfR | -0.994 |
|
|
| CueR | -0.997 |
|
|
| SoxS | -1.002 |
|
|
| FlhDC | -1.179 |
|
|
| PuuR | -1.219 |
|
|
| CysB | -1.239 |
|
|
| NagC | -1.254 |
|
|
| Nac | -1.353 |
|
|
| TrpR | -1.367 |
|
|
| ArgP | -1.383 |
|
|
| HypT | -1.549 |
|
|
| MlrA | -1.822 |
|
|
| GadE | -1.974 |
|
|
| MetJ | -2.105 |
|
|
| Cra | -2.703 |
|
|
| MalT | -2.991 |
|
|
| NtrC | -3.044 |
|
|
| PurR | -3.169 |
|
|
| Sigma70 | -3.498 |
|
|