GSE67402: E.coli regulatory changes under long-term starvation
| WM name | Z-value | Associated genes | Logo |
|---|---|---|---|
| H-NS | 4.478 |
|
|
| GlpR | 3.741 |
|
|
| Sigma54 | 3.176 |
|
|
| NanR | 2.467 |
|
|
| Fis | 2.175 |
|
|
| AraC | 2.034 |
|
|
| LexA | 1.930 |
|
|
| Sigma38 | 1.916 |
|
|
| RcsB-BglJ | 1.880 |
|
|
| Sigma28 | 1.800 |
|
|
| NarP | 1.529 |
|
|
| NsrR | 1.464 |
|
|
| PhoB | 1.356 |
|
|
| AgaR | 1.298 |
|
|
| YjjQ | 1.290 |
|
|
| PspF | 1.275 |
|
|
| CaiF | 1.263 |
|
|
| NarL | 1.244 |
|
|
| ComR | 1.208 |
|
|
| Dan | 1.187 |
|
|
| CynR | 1.183 |
|
|
| AllR | 1.182 |
|
|
| YdeO | 1.173 |
|
|
| ExuR | 1.119 |
|
|
| CRP | 1.117 |
|
|
| DinJ-YafQ | 1.090 |
|
|
| LsrR | 1.067 |
|
|
| StpA | 0.973 |
|
|
| RhaS | 0.970 |
|
|
| MntR | 0.948 |
|
|
| CpxR | 0.912 |
|
|
| BaeR | 0.892 |
|
|
| UxuR | 0.872 |
|
|
| DcuR | 0.867 |
|
|
| TorR | 0.852 |
|
|
| MelR | 0.826 |
|
|
| GlcC | 0.825 |
|
|
| PrpR | 0.822 |
|
|
| TdcA | 0.772 |
|
|
| NorR | 0.718 |
|
|
| PaaX | 0.717 |
|
|
| ZraR | 0.692 |
|
|
| EvgA | 0.667 |
|
|
| RutR | 0.646 |
|
|
| HyfR | 0.642 |
|
|
| AidB | 0.639 |
|
|
| MngR | 0.631 |
|
|
| RcsAB | 0.629 |
|
|
| GatR | 0.629 |
|
|
| CdaR | 0.624 |
|
|
| IdnR | 0.620 |
|
|
| CadC | 0.616 |
|
|
| DicA | 0.600 |
|
|
| GadE-RcsB | 0.581 |
|
|
| DsdC | 0.564 |
|
|
| MhpR | 0.560 |
|
|
| CecR | 0.554 |
|
|
| FeaR | 0.553 |
|
|
| MqsA | 0.531 |
|
|
| AdiY | 0.528 |
|
|
| BolA | 0.511 |
|
|
| FucR | 0.501 |
|
|
| RcdA | 0.490 |
|
|
| YpdB | 0.483 |
|
|
| PutA | 0.474 |
|
|
| BluR | 0.469 |
|
|
| XapR | 0.465 |
|
|
| Ada | 0.456 |
|
|
| ArsR | 0.456 |
|
|
| NimR | 0.433 |
|
|
| MarR | 0.431 |
|
|
| AppY | 0.426 |
|
|
| MarA | 0.426 |
|
|
| LysR | 0.401 |
|
|
| ArcA | 0.384 |
|
|
| XylR | 0.378 |
|
|
| LacI | 0.366 |
|
|
| ChbR | 0.354 |
|
|
| IscR | 0.333 |
|
|
| RtcR | 0.323 |
|
|
| DeoR | 0.312 |
|
|
| UhpA | 0.278 |
|
|
| MtlR | 0.277 |
|
|
| RclR | 0.273 |
|
|
| EbgR | 0.273 |
|
|
| UvrY | 0.262 |
|
|
| UidR | 0.261 |
|
|
| YeiL | 0.260 |
|
|
| UlaR | 0.258 |
|
|
| SutR | 0.257 |
|
|
| TreR | 0.253 |
|
|
| AllS | 0.227 |
|
|
| Mlc | 0.200 |
|
|
| YiaJ | 0.200 |
|
|
| YqhC | 0.199 |
|
|
| KdpE | 0.186 |
|
|
| McbR | 0.175 |
|
|
| MetR | 0.162 |
|
|
| AscG | 0.156 |
|
|
| BetI | 0.146 |
|
|
| PgrR | 0.142 |
|
|
| GadX | 0.130 |
|
|
| NadR | 0.120 |
|
|
| BirA | 0.118 |
|
|
| YqjI | 0.116 |
|
|
| HipB | 0.114 |
|
|
| MurR | 0.113 |
|
|
| HipAB | 0.113 |
|
|
| GlrR | 0.098 |
|
|
| LldR | 0.087 |
|
|
| PhoP | 0.086 |
|
|
| IclR | 0.081 |
|
|
| SlyA | 0.059 |
|
|
| FliZ | 0.034 |
|
|
| TyrR | 0.030 |
|
|
| RelB | 0.010 |
|
|
| AcrR | -0.002 |
|
|
| NemR | -0.017 |
|
|
| RcsB | -0.020 |
|
|
| NhaR | -0.033 |
|
|
| MalI | -0.041 |
|
|
| OxyR | -0.048 |
|
|
| HcaR | -0.054 |
|
|
| CsgD | -0.061 |
|
|
| CsiR | -0.076 |
|
|
| SoxR | -0.081 |
|
|
| AtoC | -0.088 |
|
|
| ZntR | -0.090 |
|
|
| DpiA | -0.111 |
|
|
| GcvA | -0.120 |
|
|
| RhaR | -0.121 |
|
|
| NikR | -0.130 |
|
|
| GalS | -0.148 |
|
|
| GalR | -0.148 |
|
|
| AlsR | -0.149 |
|
|
| SdiA | -0.156 |
|
|
| LrhA | -0.173 |
|
|
| FhlA | -0.183 |
|
|
| HU | -0.191 |
|
|
| GutM | -0.197 |
|
|
| OmpR | -0.201 |
|
|
| Cbl | -0.201 |
|
|
| CusR | -0.202 |
|
|
| YedW | -0.202 |
|
|
| CreB | -0.212 |
|
|
| PepA | -0.229 |
|
|
| BasR | -0.262 |
|
|
| AsnC | -0.296 |
|
|
| KdgR | -0.313 |
|
|
| GadW | -0.319 |
|
|
| RbsR | -0.338 |
|
|
| Zur | -0.343 |
|
|
| EnvR | -0.350 |
|
|
| SgrR | -0.352 |
|
|
| PdhR | -0.361 |
|
|
| MraZ | -0.381 |
|
|
| DhaR | -0.391 |
|
|
| FabR | -0.410 |
|
|
| GntR | -0.432 |
|
|
| Lrp | -0.445 |
|
|
| ModE | -0.460 |
|
|
| Rob | -0.469 |
|
|
| DnaA | -0.480 |
|
|
| MazE-MazF | -0.483 |
|
|
| MazE | -0.483 |
|
|
| HdfR | -0.488 |
|
|
| RstA | -0.503 |
|
|
| YehT | -0.522 |
|
|
| MprA | -0.530 |
|
|
| FadR | -0.550 |
|
|
| MatA | -0.561 |
|
|
| AccB | -0.570 |
|
|
| Sigma19 | -0.588 |
|
|
| NrdR | -0.595 |
|
|
| QseB | -0.629 |
|
|
| CspA | -0.648 |
|
|
| NagC | -0.653 |
|
|
| AlaS | -0.667 |
|
|
| EnvY | -0.745 |
|
|
| CytR | -0.758 |
|
|
| Fur | -0.766 |
|
|
| Nac | -0.777 |
|
|
| ArgR | -0.777 |
|
|
| FlhDC | -0.782 |
|
|
| LeuO | -0.894 |
|
|
| TrpR | -0.984 |
|
|
| CueR | -1.039 |
|
|
| IlvY | -1.149 |
|
|
| MlrA | -1.180 |
|
|
| CysB | -1.180 |
|
|
| ArgP | -1.195 |
|
|
| IHF | -1.223 |
|
|
| FNR | -1.295 |
|
|
| Sigma32 | -1.350 |
|
|
| SoxS | -1.363 |
|
|
| PuuR | -1.401 |
|
|
| HypT | -1.429 |
|
|
| GadE | -1.515 |
|
|
| MetJ | -1.539 |
|
|
| Sigma24 | -1.706 |
|
|
| NtrC | -2.365 |
|
|
| MalT | -2.765 |
|
|
| Cra | -2.769 |
|
|
| PurR | -3.114 |
|
|
| Sigma70 | -4.116 |
|
|