GSE67402: E.coli regulatory changes under long-term starvation
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
exuR
|
exuR | ExuR DNA-binding transcriptional repressor |
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| exuR | -0.39 | 4.5e-02 | Click! |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| uxaB | 12.76 |
uxaB
|
altronate oxidoreductase |
|
| exuT | 6.89 |
exuT
|
hexuronate transporter |
|
| lgoR | 4.23 |
lgoR
|
predicted DNA-binding transcriptional regulator |
|
| uxuAB | 3.58 |
uxuA
uxuB
|
D-mannonate dehydratase D-mannonate oxidoreductase |
|
| uxaCA | 2.74 |
uxaA
uxaC
|
D-altronate dehydratase D-glucuronate isomerase/D-galacturonate isomerase |
|
| exuR | 1.77 |
exuR
|
ExuR DNA-binding transcriptional repressor |
|
| uxuR | 1.32 |
uxuR
|
UxuR DNA-binding transcriptional repressor |
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 6.4 | 19.1 | GO:0006063 | uronic acid metabolic process(GO:0006063) |
| 0.5 | 4.2 | GO:0046176 | aldonic acid metabolic process(GO:0019520) aldonic acid catabolic process(GO:0046176) |
| 0.4 | 6.9 | GO:0015718 | monocarboxylic acid transport(GO:0015718) |
| 0.0 | 1.8 | GO:1902679 | negative regulation of transcription, DNA-templated(GO:0045892) negative regulation of RNA biosynthetic process(GO:1902679) negative regulation of nucleic acid-templated transcription(GO:1903507) |
| 0.0 | 1.3 | GO:0097659 | transcription, DNA-templated(GO:0006351) nucleic acid-templated transcription(GO:0097659) |
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 6.9 | GO:0005887 | integral component of plasma membrane(GO:0005887) |
| 0.0 | 12.8 | GO:0005829 | cytosol(GO:0005829) |
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.6 | 12.8 | GO:0051287 | NAD binding(GO:0051287) |
| 0.5 | 6.9 | GO:0015145 | monocarboxylic acid transmembrane transporter activity(GO:0008028) monosaccharide transmembrane transporter activity(GO:0015145) |
| 0.4 | 6.3 | GO:0008198 | ferrous iron binding(GO:0008198) |