GSE67402: E.coli regulatory changes under long-term starvation
| WM name | Z-value | Associated genes | Logo |
|---|---|---|---|
| H-NS | 4.360 |
|
|
| Fis | 3.512 |
|
|
| Sigma38 | 2.771 |
|
|
| Sigma54 | 2.472 |
|
|
| AraC | 1.951 |
|
|
| Sigma28 | 1.897 |
|
|
| PhoB | 1.802 |
|
|
| RcsB-BglJ | 1.796 |
|
|
| YdeO | 1.697 |
|
|
| EvgA | 1.496 |
|
|
| TorR | 1.427 |
|
|
| RhaS | 1.238 |
|
|
| PaaX | 1.201 |
|
|
| NarP | 1.199 |
|
|
| IdnR | 1.176 |
|
|
| CynR | 1.160 |
|
|
| DcuR | 1.157 |
|
|
| RcsAB | 1.148 |
|
|
| DsdC | 1.127 |
|
|
| FeaR | 1.005 |
|
|
| McbR | 1.002 |
|
|
| CdaR | 0.996 |
|
|
| DicA | 0.947 |
|
|
| AllR | 0.945 |
|
|
| YjjQ | 0.941 |
|
|
| GadX | 0.828 |
|
|
| MntR | 0.808 |
|
|
| MurR | 0.803 |
|
|
| Dan | 0.802 |
|
|
| GntR | 0.795 |
|
|
| NimR | 0.793 |
|
|
| SoxR | 0.774 |
|
|
| LsrR | 0.756 |
|
|
| RcsB | 0.751 |
|
|
| RutR | 0.747 |
|
|
| GatR | 0.742 |
|
|
| MngR | 0.728 |
|
|
| LexA | 0.709 |
|
|
| GadE-RcsB | 0.691 |
|
|
| MqsA | 0.680 |
|
|
| CadC | 0.677 |
|
|
| OmpR | 0.674 |
|
|
| NagC | 0.669 |
|
|
| XapR | 0.664 |
|
|
| UhpA | 0.641 |
|
|
| PrpR | 0.635 |
|
|
| TreR | 0.620 |
|
|
| RclR | 0.609 |
|
|
| YiaJ | 0.608 |
|
|
| EbgR | 0.594 |
|
|
| MelR | 0.592 |
|
|
| MatA | 0.589 |
|
|
| BasR | 0.557 |
|
|
| BolA | 0.554 |
|
|
| GlpR | 0.526 |
|
|
| YpdB | 0.521 |
|
|
| Ada | 0.515 |
|
|
| ExuR | 0.509 |
|
|
| Lrp | 0.496 |
|
|
| LysR | 0.496 |
|
|
| NarL | 0.493 |
|
|
| AidB | 0.487 |
|
|
| DpiA | 0.483 |
|
|
| AgaR | 0.483 |
|
|
| RcdA | 0.480 |
|
|
| KdpE | 0.474 |
|
|
| NanR | 0.470 |
|
|
| LacI | 0.468 |
|
|
| MalI | 0.463 |
|
|
| CaiF | 0.462 |
|
|
| LeuO | 0.461 |
|
|
| UlaR | 0.436 |
|
|
| UxuR | 0.433 |
|
|
| MtlR | 0.409 |
|
|
| OxyR | 0.406 |
|
|
| ComR | 0.406 |
|
|
| GadW | 0.379 |
|
|
| YeiL | 0.379 |
|
|
| GlrR | 0.356 |
|
|
| NsrR | 0.344 |
|
|
| MhpR | 0.338 |
|
|
| SlyA | 0.336 |
|
|
| ArsR | 0.315 |
|
|
| DinJ-YafQ | 0.308 |
|
|
| CsgD | 0.287 |
|
|
| XylR | 0.271 |
|
|
| IHF | 0.268 |
|
|
| AllS | 0.264 |
|
|
| PgrR | 0.242 |
|
|
| NorR | 0.236 |
|
|
| YqjI | 0.235 |
|
|
| RhaR | 0.223 |
|
|
| FucR | 0.199 |
|
|
| BirA | 0.192 |
|
|
| ZraR | 0.190 |
|
|
| MarR | 0.172 |
|
|
| RelB | 0.164 |
|
|
| RtcR | 0.163 |
|
|
| IclR | 0.157 |
|
|
| Cbl | 0.153 |
|
|
| BetI | 0.140 |
|
|
| FhlA | 0.132 |
|
|
| AtoC | 0.127 |
|
|
| CreB | 0.096 |
|
|
| GlcC | 0.095 |
|
|
| HipB | 0.094 |
|
|
| AscG | 0.074 |
|
|
| FliZ | 0.074 |
|
|
| BluR | 0.074 |
|
|
| HcaR | 0.055 |
|
|
| Rob | 0.050 |
|
|
| CytR | 0.047 |
|
|
| NikR | 0.046 |
|
|
| BaeR | 0.039 |
|
|
| PutA | 0.036 |
|
|
| PspF | 0.022 |
|
|
| NadR | 0.022 |
|
|
| SutR | 0.005 |
|
|
| UidR | -0.002 |
|
|
| AppY | -0.006 |
|
|
| MraZ | -0.006 |
|
|
| HU | -0.010 |
|
|
| HipAB | -0.025 |
|
|
| AcrR | -0.028 |
|
|
| TdcA | -0.028 |
|
|
| MetR | -0.044 |
|
|
| SdiA | -0.054 |
|
|
| UvrY | -0.065 |
|
|
| NemR | -0.080 |
|
|
| NrdR | -0.092 |
|
|
| GalS | -0.107 |
|
|
| GalR | -0.107 |
|
|
| Nac | -0.109 |
|
|
| CsiR | -0.120 |
|
|
| ZntR | -0.136 |
|
|
| Zur | -0.145 |
|
|
| AlsR | -0.152 |
|
|
| ChbR | -0.153 |
|
|
| LldR | -0.160 |
|
|
| HyfR | -0.166 |
|
|
| YqhC | -0.176 |
|
|
| GutM | -0.188 |
|
|
| ArgR | -0.202 |
|
|
| GcvA | -0.213 |
|
|
| AdiY | -0.225 |
|
|
| SgrR | -0.230 |
|
|
| EnvR | -0.254 |
|
|
| StpA | -0.261 |
|
|
| CecR | -0.265 |
|
|
| DhaR | -0.295 |
|
|
| FabR | -0.312 |
|
|
| QseB | -0.334 |
|
|
| PhoP | -0.363 |
|
|
| NhaR | -0.369 |
|
|
| Sigma32 | -0.420 |
|
|
| DeoR | -0.429 |
|
|
| KdgR | -0.443 |
|
|
| MarA | -0.490 |
|
|
| PepA | -0.507 |
|
|
| AccB | -0.542 |
|
|
| YehT | -0.557 |
|
|
| Sigma19 | -0.568 |
|
|
| IlvY | -0.582 |
|
|
| MazE-MazF | -0.588 |
|
|
| MazE | -0.588 |
|
|
| AsnC | -0.614 |
|
|
| CusR | -0.630 |
|
|
| YedW | -0.630 |
|
|
| IscR | -0.674 |
|
|
| Mlc | -0.683 |
|
|
| RbsR | -0.686 |
|
|
| TyrR | -0.690 |
|
|
| AlaS | -0.693 |
|
|
| MprA | -0.706 |
|
|
| ArgP | -0.710 |
|
|
| DnaA | -0.766 |
|
|
| EnvY | -0.793 |
|
|
| CpxR | -0.795 |
|
|
| CueR | -0.831 |
|
|
| ModE | -0.861 |
|
|
| LrhA | -0.878 |
|
|
| FlhDC | -0.944 |
|
|
| HdfR | -0.969 |
|
|
| SoxS | -1.023 |
|
|
| PuuR | -1.026 |
|
|
| CspA | -1.039 |
|
|
| MlrA | -1.045 |
|
|
| RstA | -1.054 |
|
|
| TrpR | -1.081 |
|
|
| HypT | -1.302 |
|
|
| FNR | -1.323 |
|
|
| CRP | -1.447 |
|
|
| GadE | -1.542 |
|
|
| CysB | -1.557 |
|
|
| MetJ | -1.657 |
|
|
| PdhR | -1.913 |
|
|
| FadR | -1.958 |
|
|
| Fur | -2.005 |
|
|
| PurR | -2.021 |
|
|
| MalT | -2.403 |
|
|
| ArcA | -2.478 |
|
|
| Sigma24 | -2.917 |
|
|
| NtrC | -2.988 |
|
|
| Cra | -3.245 |
|
|
| Sigma70 | -4.673 |
|
|