GSE67402: E.coli regulatory changes under long-term starvation
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
tyrR
|
tyrR | TyrR DNA-binding transcriptional dual regulator |
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| tyrR | 0.72 | 2.3e-05 | Click! |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| aroF-tyrA | 14.03 |
tyrA
aroF
|
chorismate mutase / prephenate dehydrogenase 2-dehydro-3-deoxyphosphoheptonate aldolase |
|
| aroG | 13.86 |
aroG
|
2-dehydro-3-deoxyphosphoheptonate aldolase |
|
| tyrB | 6.50 |
tyrB
|
tyrosine aminotransferase |
|
| aroL-yaiA-aroM | 2.26 |
yaiA
aroL
aroM
|
predicted protein shikimate kinase II conserved protein |
|
| aroP | 0.82 |
aroP
|
aromatic amino acid:H+ symporter AroP |
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 6.8 | 20.5 | GO:0006571 | tyrosine metabolic process(GO:0006570) tyrosine biosynthetic process(GO:0006571) |
| 1.5 | 16.1 | GO:0009073 | aromatic amino acid family biosynthetic process(GO:0009073) |
| 0.2 | 0.8 | GO:0015823 | phenylalanine transport(GO:0015823) |
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 28.5 | GO:0005737 | cytoplasm(GO:0005737) |
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 9.3 | 27.9 | GO:0003849 | 3-deoxy-7-phosphoheptulonate synthase activity(GO:0003849) |
| 0.4 | 6.5 | GO:0008483 | transaminase activity(GO:0008483) |
| 0.3 | 0.8 | GO:0009977 | proton motive force dependent protein transmembrane transporter activity(GO:0009977) L-phenylalanine transmembrane transporter activity(GO:0015192) |
| 0.0 | 2.3 | GO:0016773 | phosphotransferase activity, alcohol group as acceptor(GO:0016773) |