GSE67402: E.coli regulatory changes under long-term starvation
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
gadW
|
gadW | GadW DNA-binding transcriptional dual regulator |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| gadY | 2.56 |
gadY
|
GadY |
|
| gadX | 0.96 |
gadX
|
GadX DNA-binding transcriptional dual regulator |
|
| gadBC | 0.85 |
gadB
gadC
|
glutamate decarboxylase B subunit glutamic acid:4-aminobutyrate antiporter |
|
| gadXW | 0.84 |
gadW
gadX
|
GadW DNA-binding transcriptional dual regulator GadX DNA-binding transcriptional dual regulator |
|
| slp-dctR | 0.73 |
slp
dctR
|
starvation lipoprotein predicted DNA-binding transcriptional regulator |
|
| gadW | 0.54 |
gadW
|
GadW DNA-binding transcriptional dual regulator |
|
| gadE-mdtEF | 0.07 |
mdtF
mdtE
gadE
|
MdtEF-TolC multidrug efflux pump - permease subunit MdtEF-TolC multidrug efflux pump - membrane fusion protein GadE DNA-binding transcriptional activator |
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.2 | 0.7 | GO:0043471 | regulation of cellular catabolic process(GO:0031329) regulation of cellular carbohydrate catabolic process(GO:0043471) |
| 0.2 | 0.7 | GO:0051454 | pH elevation(GO:0045852) intracellular pH elevation(GO:0051454) |
| 0.0 | 1.8 | GO:0051254 | positive regulation of transcription, DNA-templated(GO:0045893) positive regulation of RNA metabolic process(GO:0051254) positive regulation of RNA biosynthetic process(GO:1902680) positive regulation of nucleic acid-templated transcription(GO:1903508) |
| 0.0 | 0.1 | GO:0006855 | drug transmembrane transport(GO:0006855) |
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.7 | GO:0019867 | outer membrane(GO:0019867) |
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.2 | 1.7 | GO:0001140 | transcriptional activator activity, bacterial-type RNA polymerase core promoter proximal region sequence-specific binding(GO:0001140) |
| 0.1 | 0.9 | GO:0015297 | antiporter activity(GO:0015297) |