GSE67402: E.coli regulatory changes under long-term starvation
| WM name | Z-value | Associated genes | Logo |
|---|---|---|---|
| Sigma38 | 6.452 |
|
|
| IHF | 2.215 |
|
|
| Sigma54 | 2.210 |
|
|
| H-NS | 2.058 |
|
|
| OmpR | 1.789 |
|
|
| MntR | 1.761 |
|
|
| Fis | 1.724 |
|
|
| RcsB | 1.672 |
|
|
| GlpR | 1.583 |
|
|
| NagC | 1.552 |
|
|
| PhoB | 1.497 |
|
|
| AraC | 1.485 |
|
|
| DinJ-YafQ | 1.288 |
|
|
| McbR | 1.269 |
|
|
| CsgD | 1.258 |
|
|
| YdeO | 1.216 |
|
|
| GadX | 1.201 |
|
|
| DcuR | 1.141 |
|
|
| RcdA | 1.045 |
|
|
| SoxR | 1.014 |
|
|
| MtlR | 0.965 |
|
|
| UvrY | 0.941 |
|
|
| MqsA | 0.936 |
|
|
| RcsB-BglJ | 0.931 |
|
|
| DpiA | 0.923 |
|
|
| PrpR | 0.875 |
|
|
| GlrR | 0.864 |
|
|
| SoxS | 0.788 |
|
|
| BolA | 0.690 |
|
|
| ComR | 0.686 |
|
|
| Sigma28 | 0.665 |
|
|
| YjjQ | 0.664 |
|
|
| AidB | 0.646 |
|
|
| SgrR | 0.618 |
|
|
| RhaS | 0.596 |
|
|
| XylR | 0.585 |
|
|
| CynR | 0.568 |
|
|
| AtoC | 0.561 |
|
|
| IdnR | 0.543 |
|
|
| CdaR | 0.539 |
|
|
| NimR | 0.529 |
|
|
| Cbl | 0.529 |
|
|
| RelB | 0.528 |
|
|
| Sigma32 | 0.525 |
|
|
| DicA | 0.521 |
|
|
| PaaX | 0.484 |
|
|
| Lrp | 0.481 |
|
|
| DsdC | 0.460 |
|
|
| YpdB | 0.450 |
|
|
| MhpR | 0.439 |
|
|
| PgrR | 0.425 |
|
|
| IscR | 0.418 |
|
|
| LeuO | 0.409 |
|
|
| RclR | 0.391 |
|
|
| FeaR | 0.391 |
|
|
| XapR | 0.379 |
|
|
| Ada | 0.363 |
|
|
| Zur | 0.348 |
|
|
| LsrR | 0.326 |
|
|
| CytR | 0.318 |
|
|
| Dan | 0.309 |
|
|
| GatR | 0.286 |
|
|
| FabR | 0.282 |
|
|
| YqhC | 0.267 |
|
|
| EbgR | 0.266 |
|
|
| MngR | 0.250 |
|
|
| FhlA | 0.238 |
|
|
| TreR | 0.227 |
|
|
| CadC | 0.223 |
|
|
| TorR | 0.215 |
|
|
| UidR | 0.211 |
|
|
| NsrR | 0.203 |
|
|
| SlyA | 0.198 |
|
|
| PutA | 0.189 |
|
|
| UhpA | 0.184 |
|
|
| LacI | 0.181 |
|
|
| ExuR | 0.180 |
|
|
| AllR | 0.176 |
|
|
| MurR | 0.175 |
|
|
| KdpE | 0.141 |
|
|
| GadE-RcsB | 0.140 |
|
|
| CreB | 0.137 |
|
|
| Mlc | 0.098 |
|
|
| TdcA | 0.097 |
|
|
| NemR | 0.080 |
|
|
| StpA | 0.073 |
|
|
| MalI | 0.069 |
|
|
| RhaR | 0.067 |
|
|
| MraZ | 0.065 |
|
|
| YiaJ | 0.060 |
|
|
| CRP | 0.054 |
|
|
| AllS | 0.052 |
|
|
| YqjI | 0.040 |
|
|
| FucR | 0.032 |
|
|
| LysR | 0.026 |
|
|
| NorR | 0.022 |
|
|
| FadR | 0.010 |
|
|
| YeiL | 0.006 |
|
|
| GlcC | 0.003 |
|
|
| ModE | -0.015 |
|
|
| EvgA | -0.021 |
|
|
| GadW | -0.023 |
|
|
| GalS | -0.025 |
|
|
| GalR | -0.025 |
|
|
| CsiR | -0.025 |
|
|
| GcvA | -0.031 |
|
|
| HyfR | -0.032 |
|
|
| RtcR | -0.034 |
|
|
| UlaR | -0.034 |
|
|
| DeoR | -0.038 |
|
|
| NikR | -0.041 |
|
|
| LldR | -0.042 |
|
|
| OxyR | -0.044 |
|
|
| GutM | -0.054 |
|
|
| MelR | -0.059 |
|
|
| AgaR | -0.061 |
|
|
| ArsR | -0.079 |
|
|
| Rob | -0.087 |
|
|
| NanR | -0.098 |
|
|
| UxuR | -0.099 |
|
|
| EnvR | -0.126 |
|
|
| NarL | -0.139 |
|
|
| NarP | -0.140 |
|
|
| RstA | -0.147 |
|
|
| NhaR | -0.177 |
|
|
| MatA | -0.179 |
|
|
| ZraR | -0.198 |
|
|
| CaiF | -0.205 |
|
|
| AppY | -0.208 |
|
|
| IclR | -0.210 |
|
|
| CpxR | -0.216 |
|
|
| LexA | -0.220 |
|
|
| BaeR | -0.223 |
|
|
| QseB | -0.240 |
|
|
| HipAB | -0.265 |
|
|
| LrhA | -0.274 |
|
|
| NrdR | -0.279 |
|
|
| ChbR | -0.285 |
|
|
| RcsAB | -0.289 |
|
|
| SutR | -0.321 |
|
|
| GntR | -0.322 |
|
|
| HcaR | -0.323 |
|
|
| HipB | -0.335 |
|
|
| CspA | -0.336 |
|
|
| AscG | -0.348 |
|
|
| BluR | -0.355 |
|
|
| AlsR | -0.369 |
|
|
| Sigma19 | -0.378 |
|
|
| CecR | -0.385 |
|
|
| RbsR | -0.394 |
|
|
| BirA | -0.412 |
|
|
| BetI | -0.426 |
|
|
| MarR | -0.454 |
|
|
| KdgR | -0.459 |
|
|
| MazE-MazF | -0.469 |
|
|
| MazE | -0.469 |
|
|
| SdiA | -0.479 |
|
|
| MarA | -0.499 |
|
|
| AccB | -0.517 |
|
|
| AcrR | -0.545 |
|
|
| ZntR | -0.551 |
|
|
| PspF | -0.553 |
|
|
| Cra | -0.575 |
|
|
| EnvY | -0.625 |
|
|
| DnaA | -0.627 |
|
|
| AlaS | -0.636 |
|
|
| Nac | -0.637 |
|
|
| NadR | -0.658 |
|
|
| RutR | -0.700 |
|
|
| CueR | -0.722 |
|
|
| FliZ | -0.755 |
|
|
| IlvY | -0.755 |
|
|
| DhaR | -0.794 |
|
|
| YehT | -0.814 |
|
|
| MlrA | -0.817 |
|
|
| PepA | -0.836 |
|
|
| PhoP | -0.846 |
|
|
| FNR | -0.850 |
|
|
| AdiY | -0.862 |
|
|
| PdhR | -0.869 |
|
|
| HdfR | -0.925 |
|
|
| GadE | -0.941 |
|
|
| BasR | -0.944 |
|
|
| AsnC | -1.019 |
|
|
| HU | -1.028 |
|
|
| ArcA | -1.030 |
|
|
| TyrR | -1.032 |
|
|
| Fur | -1.052 |
|
|
| CusR | -1.090 |
|
|
| YedW | -1.090 |
|
|
| MetJ | -1.111 |
|
|
| HypT | -1.191 |
|
|
| MetR | -1.211 |
|
|
| MprA | -1.228 |
|
|
| PuuR | -1.363 |
|
|
| FlhDC | -1.504 |
|
|
| ArgR | -1.524 |
|
|
| TrpR | -1.691 |
|
|
| Sigma24 | -1.709 |
|
|
| ArgP | -1.847 |
|
|
| Sigma70 | -2.185 |
|
|
| CysB | -2.344 |
|
|
| MalT | -2.721 |
|
|
| NtrC | -3.024 |
|
|
| PurR | -3.229 |
|
|