GSE67402: E.coli regulatory changes under long-term starvation
| WM name | Z-value | Associated genes | Logo |
|---|---|---|---|
| Sigma38 | 4.413 |
|
|
| H-NS | 2.635 |
|
|
| Sigma54 | 2.310 |
|
|
| Fis | 1.769 |
|
|
| IHF | 1.715 |
|
|
| PhoB | 1.651 |
|
|
| NagC | 1.482 |
|
|
| AraC | 1.446 |
|
|
| MntR | 1.443 |
|
|
| LexA | 1.389 |
|
|
| OmpR | 1.361 |
|
|
| RcsB-BglJ | 1.347 |
|
|
| McbR | 1.311 |
|
|
| GadX | 1.169 |
|
|
| RcdA | 1.147 |
|
|
| YdeO | 1.109 |
|
|
| CdaR | 1.100 |
|
|
| DcuR | 1.100 |
|
|
| TorR | 1.006 |
|
|
| RcsB | 0.971 |
|
|
| GntR | 0.902 |
|
|
| LeuO | 0.867 |
|
|
| MtlR | 0.845 |
|
|
| CsgD | 0.829 |
|
|
| RelB | 0.813 |
|
|
| Sigma28 | 0.811 |
|
|
| PaaX | 0.793 |
|
|
| DinJ-YafQ | 0.772 |
|
|
| RhaS | 0.756 |
|
|
| GlrR | 0.738 |
|
|
| GadW | 0.734 |
|
|
| GlpR | 0.726 |
|
|
| AllR | 0.708 |
|
|
| EvgA | 0.689 |
|
|
| CynR | 0.688 |
|
|
| MqsA | 0.669 |
|
|
| EbgR | 0.666 |
|
|
| FeaR | 0.651 |
|
|
| PrpR | 0.633 |
|
|
| BolA | 0.616 |
|
|
| NimR | 0.613 |
|
|
| GadE-RcsB | 0.608 |
|
|
| DsdC | 0.589 |
|
|
| DicA | 0.588 |
|
|
| AidB | 0.557 |
|
|
| XylR | 0.544 |
|
|
| IdnR | 0.534 |
|
|
| MngR | 0.520 |
|
|
| UvrY | 0.512 |
|
|
| XapR | 0.511 |
|
|
| GatR | 0.505 |
|
|
| KdpE | 0.503 |
|
|
| BasR | 0.501 |
|
|
| Dan | 0.500 |
|
|
| ExuR | 0.485 |
|
|
| StpA | 0.483 |
|
|
| LsrR | 0.477 |
|
|
| ComR | 0.475 |
|
|
| TreR | 0.468 |
|
|
| CadC | 0.459 |
|
|
| NarL | 0.454 |
|
|
| UhpA | 0.443 |
|
|
| YjjQ | 0.431 |
|
|
| RclR | 0.417 |
|
|
| Ada | 0.393 |
|
|
| NsrR | 0.391 |
|
|
| NanR | 0.372 |
|
|
| LldR | 0.366 |
|
|
| AtoC | 0.351 |
|
|
| FabR | 0.338 |
|
|
| LacI | 0.333 |
|
|
| SlyA | 0.324 |
|
|
| SoxR | 0.324 |
|
|
| YpdB | 0.323 |
|
|
| CaiF | 0.307 |
|
|
| IscR | 0.276 |
|
|
| YqjI | 0.275 |
|
|
| MelR | 0.267 |
|
|
| PgrR | 0.260 |
|
|
| RcsAB | 0.244 |
|
|
| DpiA | 0.242 |
|
|
| CytR | 0.217 |
|
|
| HcaR | 0.207 |
|
|
| MurR | 0.196 |
|
|
| NarP | 0.187 |
|
|
| Cbl | 0.154 |
|
|
| MraZ | 0.150 |
|
|
| GalS | 0.143 |
|
|
| GalR | 0.143 |
|
|
| YeiL | 0.140 |
|
|
| LysR | 0.132 |
|
|
| SgrR | 0.128 |
|
|
| Rob | 0.124 |
|
|
| ArsR | 0.119 |
|
|
| NorR | 0.116 |
|
|
| NhaR | 0.110 |
|
|
| BetI | 0.105 |
|
|
| Mlc | 0.103 |
|
|
| BluR | 0.101 |
|
|
| UxuR | 0.085 |
|
|
| FhlA | 0.081 |
|
|
| MatA | 0.059 |
|
|
| ChbR | 0.049 |
|
|
| RhaR | 0.043 |
|
|
| MhpR | 0.035 |
|
|
| Lrp | 0.031 |
|
|
| TdcA | 0.028 |
|
|
| AllS | 0.019 |
|
|
| YiaJ | 0.009 |
|
|
| NrdR | 0.008 |
|
|
| YqhC | 0.003 |
|
|
| FucR | 0.002 |
|
|
| HipAB | -0.001 |
|
|
| NikR | -0.027 |
|
|
| PutA | -0.029 |
|
|
| HipB | -0.034 |
|
|
| MarR | -0.059 |
|
|
| AgaR | -0.074 |
|
|
| PspF | -0.080 |
|
|
| GlcC | -0.091 |
|
|
| OxyR | -0.092 |
|
|
| MalI | -0.094 |
|
|
| CsiR | -0.095 |
|
|
| BirA | -0.098 |
|
|
| SutR | -0.130 |
|
|
| CreB | -0.160 |
|
|
| SoxS | -0.161 |
|
|
| IclR | -0.162 |
|
|
| DeoR | -0.167 |
|
|
| CecR | -0.174 |
|
|
| RtcR | -0.191 |
|
|
| UidR | -0.197 |
|
|
| UlaR | -0.208 |
|
|
| ZraR | -0.209 |
|
|
| LrhA | -0.220 |
|
|
| AscG | -0.227 |
|
|
| BaeR | -0.246 |
|
|
| EnvR | -0.252 |
|
|
| NemR | -0.256 |
|
|
| HyfR | -0.315 |
|
|
| KdgR | -0.319 |
|
|
| RutR | -0.321 |
|
|
| PhoP | -0.342 |
|
|
| Sigma19 | -0.382 |
|
|
| CpxR | -0.382 |
|
|
| NadR | -0.388 |
|
|
| ZntR | -0.390 |
|
|
| DhaR | -0.429 |
|
|
| QseB | -0.449 |
|
|
| AccB | -0.478 |
|
|
| SdiA | -0.510 |
|
|
| AppY | -0.547 |
|
|
| GutM | -0.568 |
|
|
| AlsR | -0.598 |
|
|
| YehT | -0.600 |
|
|
| GcvA | -0.618 |
|
|
| HU | -0.619 |
|
|
| AlaS | -0.645 |
|
|
| MetJ | -0.695 |
|
|
| RstA | -0.698 |
|
|
| Nac | -0.735 |
|
|
| CRP | -0.740 |
|
|
| FadR | -0.741 |
|
|
| EnvY | -0.754 |
|
|
| FliZ | -0.763 |
|
|
| AdiY | -0.792 |
|
|
| PepA | -0.794 |
|
|
| Sigma32 | -0.812 |
|
|
| ModE | -0.836 |
|
|
| AcrR | -0.853 |
|
|
| CspA | -0.879 |
|
|
| IlvY | -0.879 |
|
|
| CueR | -0.881 |
|
|
| RbsR | -0.887 |
|
|
| MazE-MazF | -0.887 |
|
|
| MazE | -0.887 |
|
|
| AsnC | -0.899 |
|
|
| TyrR | -0.904 |
|
|
| DnaA | -0.915 |
|
|
| ArgP | -0.923 |
|
|
| MprA | -0.968 |
|
|
| CusR | -0.981 |
|
|
| YedW | -0.981 |
|
|
| MarA | -1.008 |
|
|
| MetR | -1.045 |
|
|
| Zur | -1.051 |
|
|
| ArgR | -1.093 |
|
|
| Fur | -1.102 |
|
|
| HdfR | -1.148 |
|
|
| FlhDC | -1.150 |
|
|
| PuuR | -1.205 |
|
|
| FNR | -1.216 |
|
|
| PdhR | -1.299 |
|
|
| GadE | -1.396 |
|
|
| MlrA | -1.492 |
|
|
| HypT | -1.589 |
|
|
| Cra | -1.679 |
|
|
| ArcA | -1.748 |
|
|
| TrpR | -1.779 |
|
|
| Sigma24 | -2.272 |
|
|
| PurR | -2.492 |
|
|
| MalT | -2.589 |
|
|
| CysB | -2.749 |
|
|
| NtrC | -2.893 |
|
|
| Sigma70 | -3.141 |
|
|