GSE67402: E.coli regulatory changes under long-term starvation
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
mprA
|
mprA | MprA DNA-binding transcriptional repressor |
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| mprA | 0.92 | 7.7e-12 | Click! |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| nmpC | 9.23 |
nmpC
|
outer membrane porin protein; locus of qsr prophage |
|
| acrAB | 9.18 |
acrB
acrA
|
AcrAB-TolC multidrug efflux pump - permease subunit AcrAB-TolC multidrug efflux pump - membrane fusion protein |
|
| mprA-emrAB | 7.96 |
mprA
emrA
emrB
|
MprA DNA-binding transcriptional repressor EmrAB-TolC multidrug efflux pump - membrane fusion protein EmrAB-TolC multidrug efflux pump - membrane subunit |
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 1.0 | 9.2 | GO:0006855 | drug transmembrane transport(GO:0006855) |
| 0.3 | 8.0 | GO:0046677 | response to antibiotic(GO:0046677) |
| 0.0 | 9.2 | GO:0006810 | transport(GO:0006810) |
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 1.6 | 8.0 | GO:0031237 | intrinsic component of periplasmic side of plasma membrane(GO:0031237) |
| 0.2 | 9.2 | GO:1902495 | transmembrane transporter complex(GO:1902495) transporter complex(GO:1990351) |
| 0.2 | 9.2 | GO:0009279 | cell outer membrane(GO:0009279) |
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 3.1 | 9.2 | GO:0015307 | drug:proton antiporter activity(GO:0015307) |
| 0.7 | 9.2 | GO:0015288 | porin activity(GO:0015288) wide pore channel activity(GO:0022829) |
| 0.1 | 8.0 | GO:0003677 | DNA binding(GO:0003677) |