GSE67402: E.coli regulatory changes under long-term starvation
| WM name | Z-value | Associated genes | Logo |
|---|---|---|---|
| H-NS | 4.519 |
|
|
| Fis | 4.207 |
|
|
| Sigma54 | 2.346 |
|
|
| Sigma28 | 2.247 |
|
|
| RcsB-BglJ | 2.079 |
|
|
| AraC | 2.032 |
|
|
| EvgA | 1.826 |
|
|
| TorR | 1.647 |
|
|
| PhoB | 1.624 |
|
|
| NarP | 1.574 |
|
|
| YdeO | 1.452 |
|
|
| RcsAB | 1.383 |
|
|
| CynR | 1.339 |
|
|
| PaaX | 1.338 |
|
|
| DsdC | 1.291 |
|
|
| RhaS | 1.272 |
|
|
| IdnR | 1.152 |
|
|
| Sigma38 | 1.115 |
|
|
| FeaR | 1.040 |
|
|
| DicA | 1.011 |
|
|
| NanR | 0.995 |
|
|
| DcuR | 0.982 |
|
|
| CdaR | 0.965 |
|
|
| AllR | 0.953 |
|
|
| RutR | 0.947 |
|
|
| MurR | 0.930 |
|
|
| GntR | 0.874 |
|
|
| GadE-RcsB | 0.852 |
|
|
| Dan | 0.844 |
|
|
| NimR | 0.841 |
|
|
| MngR | 0.809 |
|
|
| LsrR | 0.806 |
|
|
| CadC | 0.763 |
|
|
| Lrp | 0.751 |
|
|
| McbR | 0.735 |
|
|
| GlpR | 0.726 |
|
|
| XapR | 0.704 |
|
|
| YiaJ | 0.694 |
|
|
| LexA | 0.681 |
|
|
| GatR | 0.680 |
|
|
| PrpR | 0.677 |
|
|
| UhpA | 0.673 |
|
|
| UxuR | 0.652 |
|
|
| SoxR | 0.627 |
|
|
| ExuR | 0.623 |
|
|
| TreR | 0.612 |
|
|
| BolA | 0.612 |
|
|
| DpiA | 0.607 |
|
|
| EbgR | 0.603 |
|
|
| RclR | 0.596 |
|
|
| AgaR | 0.592 |
|
|
| CaiF | 0.588 |
|
|
| BasR | 0.584 |
|
|
| MelR | 0.578 |
|
|
| YpdB | 0.577 |
|
|
| LysR | 0.574 |
|
|
| MqsA | 0.567 |
|
|
| GadX | 0.522 |
|
|
| MalI | 0.510 |
|
|
| OmpR | 0.508 |
|
|
| YjjQ | 0.498 |
|
|
| UlaR | 0.493 |
|
|
| KdpE | 0.487 |
|
|
| LacI | 0.470 |
|
|
| Ada | 0.468 |
|
|
| YeiL | 0.455 |
|
|
| RcsB | 0.436 |
|
|
| ArsR | 0.422 |
|
|
| MatA | 0.386 |
|
|
| AidB | 0.383 |
|
|
| IclR | 0.357 |
|
|
| MhpR | 0.357 |
|
|
| BirA | 0.344 |
|
|
| SlyA | 0.328 |
|
|
| GadW | 0.326 |
|
|
| AllS | 0.326 |
|
|
| BetI | 0.313 |
|
|
| AscG | 0.311 |
|
|
| ZraR | 0.311 |
|
|
| HipB | 0.299 |
|
|
| NsrR | 0.298 |
|
|
| LeuO | 0.297 |
|
|
| NarL | 0.272 |
|
|
| XylR | 0.262 |
|
|
| YqjI | 0.258 |
|
|
| NorR | 0.254 |
|
|
| AtoC | 0.249 |
|
|
| FucR | 0.238 |
|
|
| DinJ-YafQ | 0.235 |
|
|
| RhaR | 0.218 |
|
|
| FliZ | 0.217 |
|
|
| RcdA | 0.215 |
|
|
| Nac | 0.209 |
|
|
| PspF | 0.199 |
|
|
| HipAB | 0.180 |
|
|
| Rob | 0.180 |
|
|
| HcaR | 0.173 |
|
|
| MarR | 0.172 |
|
|
| SdiA | 0.169 |
|
|
| BluR | 0.166 |
|
|
| Zur | 0.155 |
|
|
| MetR | 0.145 |
|
|
| RtcR | 0.136 |
|
|
| BaeR | 0.116 |
|
|
| CsgD | 0.116 |
|
|
| Cbl | 0.115 |
|
|
| GlrR | 0.114 |
|
|
| MntR | 0.099 |
|
|
| FhlA | 0.095 |
|
|
| ComR | 0.095 |
|
|
| PgrR | 0.094 |
|
|
| NikR | 0.087 |
|
|
| ArgR | 0.053 |
|
|
| AcrR | 0.051 |
|
|
| GlcC | 0.051 |
|
|
| MtlR | 0.039 |
|
|
| NagC | 0.034 |
|
|
| CreB | 0.034 |
|
|
| PutA | 0.031 |
|
|
| UidR | 0.029 |
|
|
| SutR | 0.020 |
|
|
| GalS | 0.016 |
|
|
| GalR | 0.016 |
|
|
| TdcA | 0.008 |
|
|
| CytR | -0.005 |
|
|
| AppY | -0.026 |
|
|
| HU | -0.037 |
|
|
| NemR | -0.059 |
|
|
| GutM | -0.060 |
|
|
| ZntR | -0.065 |
|
|
| OxyR | -0.074 |
|
|
| ChbR | -0.079 |
|
|
| DhaR | -0.084 |
|
|
| NadR | -0.088 |
|
|
| AlsR | -0.091 |
|
|
| NrdR | -0.103 |
|
|
| YqhC | -0.123 |
|
|
| AdiY | -0.133 |
|
|
| MarA | -0.162 |
|
|
| GcvA | -0.174 |
|
|
| LldR | -0.182 |
|
|
| HyfR | -0.189 |
|
|
| CecR | -0.208 |
|
|
| CsiR | -0.208 |
|
|
| RelB | -0.245 |
|
|
| EnvR | -0.253 |
|
|
| MraZ | -0.293 |
|
|
| KdgR | -0.336 |
|
|
| QseB | -0.346 |
|
|
| NhaR | -0.391 |
|
|
| ArgP | -0.415 |
|
|
| IlvY | -0.431 |
|
|
| YehT | -0.441 |
|
|
| DeoR | -0.441 |
|
|
| TyrR | -0.442 |
|
|
| Sigma19 | -0.446 |
|
|
| PepA | -0.466 |
|
|
| UvrY | -0.485 |
|
|
| StpA | -0.491 |
|
|
| FabR | -0.500 |
|
|
| RbsR | -0.527 |
|
|
| IHF | -0.545 |
|
|
| SgrR | -0.561 |
|
|
| CpxR | -0.573 |
|
|
| PhoP | -0.575 |
|
|
| AccB | -0.588 |
|
|
| CusR | -0.595 |
|
|
| YedW | -0.595 |
|
|
| AlaS | -0.612 |
|
|
| MprA | -0.616 |
|
|
| AsnC | -0.617 |
|
|
| EnvY | -0.644 |
|
|
| CueR | -0.661 |
|
|
| TrpR | -0.714 |
|
|
| MazE-MazF | -0.727 |
|
|
| MazE | -0.727 |
|
|
| DnaA | -0.770 |
|
|
| Mlc | -0.812 |
|
|
| FlhDC | -0.825 |
|
|
| PuuR | -0.836 |
|
|
| ModE | -0.867 |
|
|
| LrhA | -0.875 |
|
|
| FNR | -0.940 |
|
|
| RstA | -0.961 |
|
|
| IscR | -0.964 |
|
|
| HdfR | -1.024 |
|
|
| CysB | -1.048 |
|
|
| Sigma32 | -1.062 |
|
|
| MlrA | -1.070 |
|
|
| SoxS | -1.087 |
|
|
| CspA | -1.171 |
|
|
| HypT | -1.190 |
|
|
| CRP | -1.332 |
|
|
| MetJ | -1.362 |
|
|
| GadE | -1.434 |
|
|
| Fur | -1.507 |
|
|
| PurR | -1.656 |
|
|
| PdhR | -1.875 |
|
|
| FadR | -2.075 |
|
|
| MalT | -2.114 |
|
|
| ArcA | -2.207 |
|
|
| Sigma24 | -2.785 |
|
|
| NtrC | -2.829 |
|
|
| Cra | -3.778 |
|
|
| Sigma70 | -5.063 |
|
|