GSE67402: E.coli regulatory changes under long-term starvation
| WM name | Z-value | Associated genes | Logo |
|---|---|---|---|
| H-NS | 4.535 |
|
|
| NanR | 4.218 |
|
|
| GlpR | 3.878 |
|
|
| Fis | 2.960 |
|
|
| LexA | 2.733 |
|
|
| Sigma54 | 2.515 |
|
|
| AraC | 2.284 |
|
|
| NsrR | 2.216 |
|
|
| ComR | 1.813 |
|
|
| Sigma38 | 1.770 |
|
|
| YjjQ | 1.715 |
|
|
| UxuR | 1.693 |
|
|
| Sigma28 | 1.553 |
|
|
| NarP | 1.552 |
|
|
| StpA | 1.526 |
|
|
| ExuR | 1.448 |
|
|
| YdeO | 1.422 |
|
|
| DinJ-YafQ | 1.410 |
|
|
| ArgR | 1.369 |
|
|
| DcuR | 1.354 |
|
|
| AllR | 1.313 |
|
|
| EvgA | 1.220 |
|
|
| PspF | 1.189 |
|
|
| TorR | 1.160 |
|
|
| CpxR | 1.143 |
|
|
| OxyR | 1.121 |
|
|
| RutR | 1.072 |
|
|
| MntR | 1.016 |
|
|
| RcsB | 0.965 |
|
|
| PhoB | 0.931 |
|
|
| ZraR | 0.916 |
|
|
| IdnR | 0.902 |
|
|
| DicA | 0.873 |
|
|
| FucR | 0.848 |
|
|
| AgaR | 0.816 |
|
|
| MqsA | 0.806 |
|
|
| CadC | 0.798 |
|
|
| BasR | 0.755 |
|
|
| CynR | 0.755 |
|
|
| RcdA | 0.749 |
|
|
| RcsB-BglJ | 0.747 |
|
|
| DsdC | 0.744 |
|
|
| OmpR | 0.741 |
|
|
| GatR | 0.729 |
|
|
| RhaS | 0.691 |
|
|
| GadE-RcsB | 0.679 |
|
|
| XylR | 0.671 |
|
|
| PaaX | 0.658 |
|
|
| GlrR | 0.631 |
|
|
| RclR | 0.607 |
|
|
| NimR | 0.603 |
|
|
| CRP | 0.600 |
|
|
| BaeR | 0.587 |
|
|
| MngR | 0.586 |
|
|
| McbR | 0.581 |
|
|
| LsrR | 0.570 |
|
|
| UhpA | 0.561 |
|
|
| Ada | 0.554 |
|
|
| ArsR | 0.554 |
|
|
| GadX | 0.511 |
|
|
| FeaR | 0.509 |
|
|
| YeiL | 0.497 |
|
|
| Dan | 0.470 |
|
|
| YpdB | 0.452 |
|
|
| AidB | 0.446 |
|
|
| SoxR | 0.432 |
|
|
| UidR | 0.428 |
|
|
| NorR | 0.426 |
|
|
| MetR | 0.423 |
|
|
| CaiF | 0.418 |
|
|
| XapR | 0.414 |
|
|
| HipB | 0.412 |
|
|
| Mlc | 0.402 |
|
|
| BolA | 0.402 |
|
|
| MelR | 0.401 |
|
|
| CecR | 0.400 |
|
|
| YiaJ | 0.392 |
|
|
| RelB | 0.388 |
|
|
| RcsAB | 0.388 |
|
|
| EbgR | 0.376 |
|
|
| CdaR | 0.375 |
|
|
| UlaR | 0.367 |
|
|
| Zur | 0.365 |
|
|
| NarL | 0.364 |
|
|
| MarR | 0.361 |
|
|
| FliZ | 0.346 |
|
|
| BluR | 0.339 |
|
|
| MarA | 0.325 |
|
|
| MtlR | 0.320 |
|
|
| LysR | 0.316 |
|
|
| NemR | 0.310 |
|
|
| BirA | 0.278 |
|
|
| KdpE | 0.271 |
|
|
| RhaR | 0.265 |
|
|
| DpiA | 0.249 |
|
|
| CsgD | 0.239 |
|
|
| TreR | 0.239 |
|
|
| IclR | 0.233 |
|
|
| PrpR | 0.225 |
|
|
| HipAB | 0.225 |
|
|
| BetI | 0.202 |
|
|
| AllS | 0.198 |
|
|
| LacI | 0.194 |
|
|
| PgrR | 0.188 |
|
|
| SgrR | 0.182 |
|
|
| MalI | 0.174 |
|
|
| MurR | 0.169 |
|
|
| NhaR | 0.165 |
|
|
| ChbR | 0.153 |
|
|
| YqhC | 0.123 |
|
|
| SutR | 0.116 |
|
|
| IHF | 0.110 |
|
|
| GalS | 0.103 |
|
|
| GalR | 0.103 |
|
|
| AcrR | 0.102 |
|
|
| HcaR | 0.101 |
|
|
| NadR | 0.086 |
|
|
| SlyA | 0.085 |
|
|
| NikR | 0.081 |
|
|
| AscG | 0.044 |
|
|
| IscR | 0.018 |
|
|
| GutM | 0.002 |
|
|
| HyfR | -0.001 |
|
|
| AtoC | -0.006 |
|
|
| DeoR | -0.016 |
|
|
| LrhA | -0.022 |
|
|
| MhpR | -0.030 |
|
|
| LeuO | -0.036 |
|
|
| CytR | -0.037 |
|
|
| RtcR | -0.047 |
|
|
| GadW | -0.052 |
|
|
| GntR | -0.068 |
|
|
| MatA | -0.089 |
|
|
| NrdR | -0.122 |
|
|
| AsnC | -0.129 |
|
|
| FabR | -0.138 |
|
|
| YqjI | -0.150 |
|
|
| Cbl | -0.157 |
|
|
| ZntR | -0.158 |
|
|
| TyrR | -0.161 |
|
|
| TdcA | -0.173 |
|
|
| PutA | -0.180 |
|
|
| CsiR | -0.184 |
|
|
| AlsR | -0.193 |
|
|
| GlcC | -0.221 |
|
|
| MraZ | -0.258 |
|
|
| LldR | -0.272 |
|
|
| AppY | -0.275 |
|
|
| PepA | -0.302 |
|
|
| DhaR | -0.356 |
|
|
| GcvA | -0.363 |
|
|
| EnvR | -0.376 |
|
|
| MazE-MazF | -0.408 |
|
|
| MazE | -0.408 |
|
|
| HU | -0.412 |
|
|
| PhoP | -0.421 |
|
|
| QseB | -0.427 |
|
|
| YehT | -0.464 |
|
|
| AdiY | -0.470 |
|
|
| FhlA | -0.493 |
|
|
| RbsR | -0.502 |
|
|
| AccB | -0.517 |
|
|
| Sigma32 | -0.533 |
|
|
| IlvY | -0.541 |
|
|
| CreB | -0.543 |
|
|
| SdiA | -0.575 |
|
|
| TrpR | -0.611 |
|
|
| KdgR | -0.615 |
|
|
| DnaA | -0.624 |
|
|
| AlaS | -0.675 |
|
|
| CusR | -0.679 |
|
|
| YedW | -0.679 |
|
|
| MprA | -0.691 |
|
|
| ModE | -0.715 |
|
|
| SoxS | -0.730 |
|
|
| Rob | -0.732 |
|
|
| CspA | -0.754 |
|
|
| EnvY | -0.769 |
|
|
| ArcA | -0.770 |
|
|
| Sigma19 | -0.826 |
|
|
| FNR | -0.851 |
|
|
| FadR | -0.854 |
|
|
| NagC | -0.862 |
|
|
| RstA | -0.891 |
|
|
| Lrp | -0.942 |
|
|
| PdhR | -0.948 |
|
|
| CueR | -1.042 |
|
|
| Nac | -1.058 |
|
|
| PuuR | -1.125 |
|
|
| ArgP | -1.177 |
|
|
| HdfR | -1.251 |
|
|
| CysB | -1.289 |
|
|
| FlhDC | -1.295 |
|
|
| UvrY | -1.306 |
|
|
| HypT | -1.408 |
|
|
| MlrA | -1.569 |
|
|
| GadE | -1.764 |
|
|
| Sigma24 | -1.840 |
|
|
| Fur | -1.939 |
|
|
| MetJ | -2.199 |
|
|
| Cra | -2.929 |
|
|
| PurR | -3.274 |
|
|
| NtrC | -3.305 |
|
|
| MalT | -3.751 |
|
|
| Sigma70 | -3.986 |
|
|