GSE67402: E.coli regulatory changes under long-term starvation
| WM name | Z-value | Associated genes | Logo |
|---|---|---|---|
| H-NS | 4.469 |
|
|
| GlpR | 4.434 |
|
|
| LexA | 3.792 |
|
|
| NanR | 3.639 |
|
|
| Sigma54 | 3.130 |
|
|
| NsrR | 2.739 |
|
|
| AllR | 2.646 |
|
|
| Fis | 2.295 |
|
|
| AgaR | 2.073 |
|
|
| AraC | 1.989 |
|
|
| UxuR | 1.962 |
|
|
| NarP | 1.912 |
|
|
| CRP | 1.912 |
|
|
| YdeO | 1.869 |
|
|
| Sigma28 | 1.851 |
|
|
| CaiF | 1.714 |
|
|
| TorR | 1.642 |
|
|
| NarL | 1.575 |
|
|
| ComR | 1.563 |
|
|
| TrpR | 1.497 |
|
|
| GlcC | 1.474 |
|
|
| LsrR | 1.388 |
|
|
| CpxR | 1.361 |
|
|
| OxyR | 1.360 |
|
|
| CynR | 1.311 |
|
|
| RhaS | 1.266 |
|
|
| Dan | 1.260 |
|
|
| ExuR | 1.153 |
|
|
| PspF | 1.140 |
|
|
| RcsB-BglJ | 1.076 |
|
|
| MhpR | 1.068 |
|
|
| StpA | 1.067 |
|
|
| AcrR | 0.972 |
|
|
| GlrR | 0.955 |
|
|
| PrpR | 0.947 |
|
|
| AllS | 0.938 |
|
|
| TdcA | 0.932 |
|
|
| Sigma38 | 0.907 |
|
|
| EvgA | 0.899 |
|
|
| RcsAB | 0.885 |
|
|
| BluR | 0.793 |
|
|
| RcdA | 0.781 |
|
|
| NadR | 0.772 |
|
|
| MqsA | 0.701 |
|
|
| AppY | 0.679 |
|
|
| DinJ-YafQ | 0.678 |
|
|
| DicA | 0.677 |
|
|
| RtcR | 0.674 |
|
|
| MarR | 0.646 |
|
|
| PhoB | 0.645 |
|
|
| UidR | 0.639 |
|
|
| IclR | 0.637 |
|
|
| DcuR | 0.625 |
|
|
| NimR | 0.625 |
|
|
| CadC | 0.617 |
|
|
| BaeR | 0.616 |
|
|
| FeaR | 0.610 |
|
|
| FNR | 0.600 |
|
|
| UlaR | 0.579 |
|
|
| NorR | 0.566 |
|
|
| XylR | 0.551 |
|
|
| MarA | 0.545 |
|
|
| IHF | 0.531 |
|
|
| FucR | 0.530 |
|
|
| MngR | 0.529 |
|
|
| IdnR | 0.520 |
|
|
| AdiY | 0.506 |
|
|
| UhpA | 0.504 |
|
|
| RelB | 0.495 |
|
|
| AtoC | 0.457 |
|
|
| ArsR | 0.450 |
|
|
| CecR | 0.448 |
|
|
| NemR | 0.446 |
|
|
| GatR | 0.439 |
|
|
| RcsB | 0.434 |
|
|
| EbgR | 0.432 |
|
|
| LacI | 0.420 |
|
|
| DsdC | 0.414 |
|
|
| YpdB | 0.406 |
|
|
| YiaJ | 0.396 |
|
|
| YqhC | 0.394 |
|
|
| YjjQ | 0.391 |
|
|
| HyfR | 0.373 |
|
|
| HipB | 0.362 |
|
|
| KdpE | 0.353 |
|
|
| McbR | 0.336 |
|
|
| RclR | 0.318 |
|
|
| RutR | 0.307 |
|
|
| PgrR | 0.304 |
|
|
| LrhA | 0.296 |
|
|
| FliZ | 0.264 |
|
|
| PaaX | 0.259 |
|
|
| XapR | 0.258 |
|
|
| YeiL | 0.249 |
|
|
| AscG | 0.242 |
|
|
| NhaR | 0.222 |
|
|
| IscR | 0.212 |
|
|
| SgrR | 0.208 |
|
|
| AidB | 0.208 |
|
|
| TreR | 0.196 |
|
|
| GadE-RcsB | 0.193 |
|
|
| SoxR | 0.191 |
|
|
| HipAB | 0.191 |
|
|
| Cbl | 0.160 |
|
|
| ModE | 0.160 |
|
|
| LysR | 0.159 |
|
|
| BirA | 0.146 |
|
|
| MtlR | 0.135 |
|
|
| ChbR | 0.134 |
|
|
| BasR | 0.106 |
|
|
| NikR | 0.105 |
|
|
| BolA | 0.104 |
|
|
| Lrp | 0.101 |
|
|
| YqjI | 0.078 |
|
|
| MetR | 0.069 |
|
|
| RhaR | 0.059 |
|
|
| GutM | 0.054 |
|
|
| RbsR | 0.051 |
|
|
| OmpR | 0.045 |
|
|
| HcaR | 0.024 |
|
|
| Ada | 0.020 |
|
|
| EnvR | 0.009 |
|
|
| MelR | 0.005 |
|
|
| LldR | -0.037 |
|
|
| Zur | -0.041 |
|
|
| PhoP | -0.068 |
|
|
| DeoR | -0.081 |
|
|
| Mlc | -0.086 |
|
|
| ArgR | -0.089 |
|
|
| RstA | -0.093 |
|
|
| SlyA | -0.111 |
|
|
| PutA | -0.115 |
|
|
| MprA | -0.143 |
|
|
| MurR | -0.144 |
|
|
| NrdR | -0.156 |
|
|
| GalS | -0.207 |
|
|
| GalR | -0.207 |
|
|
| SutR | -0.208 |
|
|
| DnaA | -0.213 |
|
|
| MazE-MazF | -0.238 |
|
|
| MazE | -0.238 |
|
|
| ArcA | -0.240 |
|
|
| BetI | -0.243 |
|
|
| DpiA | -0.250 |
|
|
| MntR | -0.263 |
|
|
| FadR | -0.271 |
|
|
| GcvA | -0.273 |
|
|
| KdgR | -0.283 |
|
|
| EnvY | -0.304 |
|
|
| CdaR | -0.312 |
|
|
| MraZ | -0.322 |
|
|
| CusR | -0.326 |
|
|
| YedW | -0.326 |
|
|
| YehT | -0.326 |
|
|
| CsiR | -0.331 |
|
|
| AlaS | -0.334 |
|
|
| HU | -0.346 |
|
|
| AccB | -0.355 |
|
|
| QseB | -0.365 |
|
|
| UvrY | -0.370 |
|
|
| ZntR | -0.372 |
|
|
| CsgD | -0.389 |
|
|
| MalI | -0.418 |
|
|
| GadW | -0.451 |
|
|
| FhlA | -0.460 |
|
|
| FabR | -0.482 |
|
|
| AlsR | -0.484 |
|
|
| CreB | -0.491 |
|
|
| Sigma19 | -0.523 |
|
|
| MatA | -0.570 |
|
|
| TyrR | -0.582 |
|
|
| AsnC | -0.594 |
|
|
| ZraR | -0.597 |
|
|
| CspA | -0.604 |
|
|
| Nac | -0.629 |
|
|
| CysB | -0.690 |
|
|
| Fur | -0.704 |
|
|
| SdiA | -0.711 |
|
|
| DhaR | -0.712 |
|
|
| PdhR | -0.723 |
|
|
| HdfR | -0.728 |
|
|
| PepA | -0.821 |
|
|
| FlhDC | -0.823 |
|
|
| GntR | -0.858 |
|
|
| Rob | -0.920 |
|
|
| GadX | -0.929 |
|
|
| CueR | -0.939 |
|
|
| CytR | -0.990 |
|
|
| LeuO | -1.008 |
|
|
| IlvY | -1.029 |
|
|
| PuuR | -1.138 |
|
|
| MlrA | -1.181 |
|
|
| SoxS | -1.296 |
|
|
| NagC | -1.305 |
|
|
| HypT | -1.334 |
|
|
| GadE | -1.336 |
|
|
| Sigma24 | -1.360 |
|
|
| ArgP | -1.491 |
|
|
| MetJ | -1.681 |
|
|
| Sigma32 | -1.742 |
|
|
| MalT | -2.588 |
|
|
| NtrC | -2.728 |
|
|
| PurR | -2.791 |
|
|
| Cra | -3.087 |
|
|
| Sigma70 | -4.614 |
|
|