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GSE67402: E.coli regulatory changes under long-term starvation

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Results for Sigma19

Z-value: 0.53

Transcription factors associated with Sigma19

Gene Symbol Gene ID Gene Info

Activity profile of Sigma19 motif

Sorted Z-values of Sigma19 motif

Network of associatons between targets according to the STRING database.

Promoter Score Transcript Gene Gene Info
fecABCDE 15.18 ferric citrate ABC transporter - membrane subunit
ferric citrate ABC transporter - ATP binding subunit
ferric citrate ABC transporter - periplasmic binding protein
ferric citrate ABC transporter - membrane subunit
ferric citrate outer membrane porin FecA

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
2.2 15.2 GO:0015682 ferric iron transport(GO:0015682) trivalent inorganic cation transport(GO:0072512)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.3 15.2 GO:0055052 ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing(GO:0055052)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
2.2 15.2 GO:0015603 iron chelate transmembrane transporter activity(GO:0015603)