GSE55662: Plasticity of transcriptional regulation under antibiotic stress

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
zur Links RegulonDB EcoCyc	zur	Zur transcriptional repressor

Promoter	Log-likelihood	Transcript	Gene	Gene Info
zinT Show fit	6.60		zinT Links RegulonDB EcoCyc Show fit	cadmium-induced cadmium binding protein
ykgMO Show fit	6.58		ykgM Links RegulonDB EcoCyc Show fit ykgO Links RegulonDB EcoCyc Show fit	predicted ribosomal protein predicted ribosomal protein
znuCB Show fit	1.61		znuC Links RegulonDB EcoCyc Show fit znuB Links RegulonDB EcoCyc Show fit	Zn2+ ABC transporter - ATP binding subunit Zn2+ ABC transporter - membrane subunit

Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
2.2	6.6	GO:0046686	response to cadmium ion(GO:0046686)
0.3	1.6	GO:0010043	response to zinc ion(GO:0010043)
0.3	6.6	GO:0009267	cellular response to starvation(GO:0009267)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.2	1.6	GO:0098533	ATP-binding cassette (ABC) transporter complex(GO:0043190) ATPase dependent transmembrane transport complex(GO:0098533) ATPase complex(GO:1904949)
0.1	6.6	GO:0030288	outer membrane-bounded periplasmic space(GO:0030288)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.5	1.6	GO:0005385	zinc ion transmembrane transporter activity(GO:0005385)
0.0	3.0	GO:0008270	zinc ion binding(GO:0008270)