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GSE55662: Plasticity of transcriptional regulation under antibiotic stress

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Results for UxuR

Z-value: 0.83

Transcription factors associated with UxuR

Gene Symbol Gene ID Gene Info
uxuR UxuR DNA-binding transcriptional repressor

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
uxuR0.442.8e-01Click!

Activity profile of UxuR motif

Sorted Z-values of UxuR motif

Promoter Log-likelihood Transcript Gene Gene Info
gntP 3.05 gluconate / fructuronate transporter GntP
lgoR 3.04 predicted DNA-binding transcriptional regulator
uidABC 1.76 glucuronide:H+ symporter
outer membrane-associated protein
β-D-glucuronidase
uxuAB 1.45 D-mannonate dehydratase
D-mannonate oxidoreductase
uxuR 1.03 UxuR DNA-binding transcriptional repressor

Network of associatons between targets according to the STRING database.

First level regulatory network of UxuR

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 3.0 GO:0042873 aldonate transport(GO:0042873)
0.5 3.0 GO:0019520 aldonic acid metabolic process(GO:0019520) aldonic acid catabolic process(GO:0046176)
0.5 1.4 GO:0006063 uronic acid metabolic process(GO:0006063)
0.2 1.8 GO:1901658 glycosyl compound catabolic process(GO:1901658)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.8 GO:0043227 membrane-bounded organelle(GO:0043227) intracellular membrane-bounded organelle(GO:0043231)
0.0 3.0 GO:0005887 integral component of plasma membrane(GO:0005887)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 3.0 GO:0015128 gluconate transmembrane transporter activity(GO:0015128) aldonate transmembrane transporter activity(GO:0042879)
0.1 1.8 GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds(GO:0004553)
0.1 1.4 GO:0008198 ferrous iron binding(GO:0008198)