ISMARA results: UidR

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GSE55662: Plasticity of transcriptional regulation under antibiotic stress

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Results for UidR

Z-value: 0.21

Transcription factors associated with UidR

Gene Symbol	Gene ID	Gene Info
uidR RegulonDB EcoCyc	uidR	UidR DNA-binding transcriptional repressor

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
uidR		0.16	7.0e-01	Click!

Activity profile of UidR motif

Sorted Z-values of UidR motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
uidABC Show fit	0.26		uidB RegulonDB EcoCyc Show fit uidC RegulonDB EcoCyc Show fit uidA RegulonDB EcoCyc Show fit	glucuronide:H⁺ symporter outer membrane-associated protein β-D-glucuronidase
uidR Show fit	0.26		uidR RegulonDB EcoCyc Show fit	UidR DNA-binding transcriptional repressor

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Network of associatons between targets according to the STRING database.

First level regulatory network of UidR

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.3	GO:1901658	glycosyl compound catabolic process(GO:1901658)

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Gene overrepresentation in cellular component category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.3	GO:0043231	membrane-bounded organelle(GO:0043227) intracellular membrane-bounded organelle(GO:0043231)

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Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.3	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds(GO:0004553)

Showing 1 to 1 of 1 entries

Results for UidR

Z-value: 0.21

Transcription factors associated with UidR

Activity-expression correlation:

Activity profile of UidR motif

Sorted Z-values of UidR motif

Top targets:

Network of associatons between targets according to the STRING database.

First level regulatory network of UidR

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category: