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GSE55662: Plasticity of transcriptional regulation under antibiotic stress

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Results for TdcA

Z-value: 0.76

Transcription factors associated with TdcA

Gene Symbol Gene ID Gene Info
tdcA TdcA DNA-binding transcriptional activator

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
tdcA1.003.6e-08Click!

Activity profile of TdcA motif

Sorted Z-values of TdcA motif

Promoter Log-likelihood Transcript Gene Gene Info
tdcABCDEFG 8.68 2-ketobutyrate formate-lyase/pyruvate formate-lyase 4, inactive
propionate kinase
L-serine deaminase III
predicted enamine/imine deaminase
TdcA DNA-binding transcriptional activator
serine / threonine:H+ symporter TdcC
catabolic threonine dehydratase

Network of associatons between targets according to the STRING database.

First level regulatory network of TdcA

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
2.9 8.7 GO:0006565 L-serine catabolic process(GO:0006565)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 8.7 GO:0005887 integral component of plasma membrane(GO:0005887)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
2.2 8.7 GO:0008861 formate C-acetyltransferase activity(GO:0008861)