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GSE55662: Plasticity of transcriptional regulation under antibiotic stress

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Results for RcsB-BglJ

Z-value: 3.58

Transcription factors associated with RcsB-BglJ

Gene Symbol Gene ID Gene Info
rcsB
rcsB RcsB
bglJ
bglJ BglJ DNA-binding transcriptional regulator

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
rcsB-1.001.3e-07Click!
bglJ0.974.7e-05Click!
yjjQ0.974.7e-05Click!

Activity profile of RcsB-BglJ motif

Sorted Z-values of RcsB-BglJ motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
bglG 28.72
bglG
BglG transcriptional antiterminator
molR_1 27.22
molR_1
molybdate metabolism regulator (interrupted)
yqhG 17.43
yqhG
conserved protein
yecT 16.29
yecT
predicted protein
yidL 15.61
yidL
predicted DNA-binding transcriptional regulator
ynjI 14.33
ynjI
predicted inner membrane protein
bglGFB 12.62
bglB
bglG
bglF
6-phospho-β-glucosidase B; cryptic
BglG transcriptional antiterminator
BglF
ygiZ 12.09
ygiZ
conserved inner membrane protein
sfsB 8.03
sfsB
Nlp transcriptional regulator
ynbABCD 5.27
ynbC
ynbB
ynbA
ynbD
predicted hydrolase
predicted CDP-diglyceride synthase
predicted inner membrane protein
predicted phosphatase, inner membrane protein

Network of associatons between targets according to the STRING database.

First level regulatory network of RcsB-BglJ

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.9 12.6 GO:0034219 carbohydrate transmembrane transport(GO:0034219)
0.4 5.3 GO:0009273 peptidoglycan-based cell wall biogenesis(GO:0009273)
0.1 14.1 GO:0097659 transcription, DNA-templated(GO:0006351) nucleic acid-templated transcription(GO:0097659)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 44.3 GO:0005886 plasma membrane(GO:0005886)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
4.2 12.6 GO:0008706 6-phospho-beta-glucosidase activity(GO:0008706)
0.6 28.7 GO:0003723 RNA binding(GO:0003723)
0.5 5.3 GO:0016780 phosphotransferase activity, for other substituted phosphate groups(GO:0016780)