ISMARA results: PrpR

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GSE55662: Plasticity of transcriptional regulation under antibiotic stress

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Results for PrpR

Gene Symbol	Gene ID	Gene Info
prpR RegulonDB EcoCyc	prpR	PrpR DNA-binding transcriptional dual regulator

Gene	Promoter	Pearson corr. coef.	P-value	Plot
prpR		0.42	2.9e-01	Click!

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
prpBCDE Show fit	3.11		prpD RegulonDB EcoCyc Show fit prpE RegulonDB EcoCyc Show fit prpB RegulonDB EcoCyc Show fit prpC RegulonDB EcoCyc Show fit	2-methylcitrate dehydratase propionyl-CoA synthetase 2-methylisocitrate lyase 2-methylcitrate synthase
prpR Show fit	1.53		prpR RegulonDB EcoCyc Show fit	PrpR DNA-binding transcriptional dual regulator

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Log-likelihood per target	Total log-likelihood	Term	Description
1.0	3.1	GO:0019626	short-chain fatty acid catabolic process(GO:0019626)
0.0	1.5	GO:1903508	positive regulation of transcription, DNA-templated(GO:0045893) positive regulation of RNA metabolic process(GO:0051254) positive regulation of RNA biosynthetic process(GO:1902680) positive regulation of nucleic acid-templated transcription(GO:1903508)

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Log-likelihood per target	Total log-likelihood	Term	Description
0.8	3.1	GO:0046912	transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer(GO:0046912)
0.0	1.5	GO:0003700	transcription factor activity, sequence-specific DNA binding(GO:0003700)

Showing 1 to 2 of 2 entries