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GSE55662: Plasticity of transcriptional regulation under antibiotic stress

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Results for PrpR

Z-value: 0.57

Transcription factors associated with PrpR

Gene Symbol Gene ID Gene Info
prpR PrpR DNA-binding transcriptional dual regulator

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
prpR0.422.9e-01Click!

Activity profile of PrpR motif

Sorted Z-values of PrpR motif

Promoter Log-likelihood Transcript Gene Gene Info
prpBCDE 3.11 2-methylcitrate dehydratase
propionyl-CoA synthetase
2-methylisocitrate lyase
2-methylcitrate synthase
prpR 1.53 PrpR DNA-binding transcriptional dual regulator

Network of associatons between targets according to the STRING database.

First level regulatory network of PrpR

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 3.1 GO:0019626 short-chain fatty acid catabolic process(GO:0019626)
0.0 1.5 GO:1903508 positive regulation of transcription, DNA-templated(GO:0045893) positive regulation of RNA metabolic process(GO:0051254) positive regulation of RNA biosynthetic process(GO:1902680) positive regulation of nucleic acid-templated transcription(GO:1903508)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 3.1 GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer(GO:0046912)
0.0 1.5 GO:0003700 transcription factor activity, sequence-specific DNA binding(GO:0003700)