GSE55662: Plasticity of transcriptional regulation under antibiotic stress
Gene Symbol | Gene ID | Gene Info |
---|---|---|
ompR
|
ompR | OmpR transcriptional dual regulator |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
ompR | 0.81 | 1.5e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
nmpC | 8.73 |
nmpC
|
outer membrane porin protein; locus of qsr prophage |
|
ompF | 8.57 |
ompF
|
outer membrane porin F |
|
micF | 7.47 |
micF
|
MicF |
|
sra | 6.29 |
sra
|
30S ribosomal subunit protein S22 |
|
ompC | 5.93 |
ompC
|
outer membrane protein C |
|
flhDC | 3.71 |
flhC
flhD
|
FlhC transcriptional dual regulator FlhD transcriptional dual regulator |
|
bolA | 1.93 |
bolA
|
BolA DNA-binding transcriptional dual regulator |
|
fadL | 1.39 |
fadL
|
long-chain fatty acid outer membrane porin; bacteriophage T2 receptor |
|
ecnB | 0.88 |
ecnB
|
bacteriolytic entericidin B lipoprotein |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.5 | 5.9 | GO:0015748 | organophosphate ester transport(GO:0015748) |
1.0 | 8.6 | GO:0006855 | drug transmembrane transport(GO:0006855) |
0.2 | 1.4 | GO:0006869 | lipid transport(GO:0006869) |
0.0 | 3.5 | GO:0097659 | transcription, DNA-templated(GO:0006351) nucleic acid-templated transcription(GO:0097659) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.7 | 8.6 | GO:0046930 | pore complex(GO:0046930) |
0.8 | 5.9 | GO:0045203 | integral component of cell outer membrane(GO:0045203) |
0.4 | 6.3 | GO:0022627 | small ribosomal subunit(GO:0015935) cytosolic small ribosomal subunit(GO:0022627) |
0.2 | 0.9 | GO:0031225 | anchored component of membrane(GO:0031225) |
0.1 | 2.7 | GO:0009279 | cell outer membrane(GO:0009279) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.9 | 8.6 | GO:0022885 | bacteriocin transmembrane transporter activity(GO:0022885) colicin transmembrane transporter activity(GO:0042912) |
0.8 | 10.1 | GO:0015288 | porin activity(GO:0015288) wide pore channel activity(GO:0022829) |