GSE55662: Plasticity of transcriptional regulation under antibiotic stress

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
nadR Links RegulonDB EcoCyc	nadR	NadR DNA-binding transcriptional repressor and NMN adenylyltransferase

Promoter	Log-likelihood	Transcript	Gene	Gene Info
nadB Show fit	5.87		nadB Links RegulonDB EcoCyc Show fit	L-aspartate oxidase
nadA-pnuC Show fit	2.14		nadA Links RegulonDB EcoCyc Show fit pnuC Links RegulonDB EcoCyc Show fit	quinolinate synthase nicotinamide riboside transporter

Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
2.0	8.0	GO:0019355	nicotinamide nucleotide biosynthetic process from aspartate(GO:0019355) 'de novo' NAD biosynthetic process(GO:0034627) 'de novo' NAD biosynthetic process from aspartate(GO:0034628)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	6.8	GO:0005829	cytosol(GO:0005829)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
1.0	5.9	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors(GO:0016638)
0.4	2.1	GO:0005337	nucleoside transmembrane transporter activity(GO:0005337) nucleobase-containing compound transmembrane transporter activity(GO:0015932)