ISMARA results: MqsA

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GSE55662: Plasticity of transcriptional regulation under antibiotic stress

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Results for MqsA

Z-value: 0.60

Transcription factors associated with MqsA

Gene Symbol	Gene ID	Gene Info
mqsA RegulonDB EcoCyc	mqsA	MqsA antitoxin of the MqsRA toxin-antitoxin system and DNA-binding transcriptional repressor

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
mqsA		0.20	6.4e-01	Click!

Activity profile of MqsA motif

Sorted Z-values of MqsA motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
cspD Show fit	5.29		cspD RegulonDB EcoCyc Show fit	DNA replication inhibitor
rpoS Show fit	3.44		rpoS RegulonDB EcoCyc Show fit	RNA polymerase, sigma S (sigma 38) factor

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Network of associatons between targets according to the STRING database.

First level regulatory network of MqsA

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
1.3	5.3	GO:0051053	negative regulation of DNA replication(GO:0008156) negative regulation of DNA metabolic process(GO:0051053)
0.7	3.4	GO:0001121	transcription from bacterial-type RNA polymerase promoter(GO:0001121)

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Gene overrepresentation in cellular component category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	8.7	GO:0005737	cytoplasm(GO:0005737)

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Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.5	5.3	GO:0003697	single-stranded DNA binding(GO:0003697)
0.9	3.4	GO:0001000	bacterial-type RNA polymerase core enzyme binding(GO:0001000)

Showing 1 to 2 of 2 entries

Results for MqsA

Z-value: 0.60

Transcription factors associated with MqsA

Activity-expression correlation:

Activity profile of MqsA motif

Sorted Z-values of MqsA motif

Top targets:

Network of associatons between targets according to the STRING database.

First level regulatory network of MqsA

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category: