GSE55662: Plasticity of transcriptional regulation under antibiotic stress

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
mprA Links RegulonDB EcoCyc	mprA	MprA DNA-binding transcriptional repressor

Gene	Promoter	Pearson corr. coef.	P-value	Plot
mprA		0.81	1.4e-02	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
nmpC Show fit	4.07		nmpC Links RegulonDB EcoCyc Show fit	outer membrane porin protein; locus of qsr prophage
acrAB Show fit	0.64		acrB Links RegulonDB EcoCyc Show fit acrA Links RegulonDB EcoCyc Show fit	AcrAB-TolC multidrug efflux pump - permease subunit AcrAB-TolC multidrug efflux pump - membrane fusion protein

Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.6	GO:0006855	drug transmembrane transport(GO:0006855)
0.0	4.1	GO:0006810	transport(GO:0006810)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	4.1	GO:0009279	cell outer membrane(GO:0009279)
0.0	0.6	GO:1990351	transmembrane transporter complex(GO:1902495) transporter complex(GO:1990351)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.3	4.1	GO:0015288	porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.2	0.6	GO:0015307	drug:proton antiporter activity(GO:0015307)