ISMARA results: MngR

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GSE55662: Plasticity of transcriptional regulation under antibiotic stress

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Results for MngR

Z-value: 0.90

Transcription factors associated with MngR

Gene Symbol	Gene ID	Gene Info
mngR RegulonDB EcoCyc	mngR	MngR DNA-binding transcriptional repressor

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
mngR		0.86	6.1e-03	Click!

Activity profile of MngR motif

Sorted Z-values of MngR motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
mngAB Show fit	6.45		mngA RegulonDB EcoCyc Show fit mngB RegulonDB EcoCyc Show fit	2-O-α-mannosyl-D-glycerate PTS permease α-mannosidase
mngR Show fit	4.56		mngR RegulonDB EcoCyc Show fit	MngR DNA-binding transcriptional repressor

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Network of associatons between targets according to the STRING database.

First level regulatory network of MngR

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
1.6	6.4	GO:1901656	glycoside transport(GO:1901656)
0.1	4.6	GO:0009408	response to heat(GO:0009408)

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Gene overrepresentation in cellular component category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	6.4	GO:0005887	integral component of plasma membrane(GO:0005887)

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Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.4	6.4	GO:0090563	protein-phosphocysteine-sugar phosphotransferase activity(GO:0090563)
0.1	4.6	GO:0003700	transcription factor activity, sequence-specific DNA binding(GO:0003700)

Showing 1 to 2 of 2 entries

Results for MngR

Z-value: 0.90

Transcription factors associated with MngR

Activity-expression correlation:

Activity profile of MngR motif

Sorted Z-values of MngR motif

Top targets:

Network of associatons between targets according to the STRING database.

First level regulatory network of MngR

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category: