ISMARA results: IscR

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GSE55662: Plasticity of transcriptional regulation under antibiotic stress

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Results for IscR

Gene Symbol	Gene ID	Gene Info
iscR RegulonDB EcoCyc	iscR	IscR DNA-binding transcriptional dual regulator

Gene	Promoter	Pearson corr. coef.	P-value	Plot
iscR		0.88	4.0e-03	Click!

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Promoter	Log-likelihood	Gene	Gene Info
iscRSUA Show fit	2.43	iscU RegulonDB EcoCyc Show fit iscA RegulonDB EcoCyc Show fit iscS RegulonDB EcoCyc Show fit iscR RegulonDB EcoCyc Show fit	scaffold protein for iron-sulfur cluster assembly iron-sulfur cluster assembly protein cysteine desulfurase IscR DNA-binding transcriptional dual regulator
nfuA Show fit	2.15	nfuA RegulonDB EcoCyc Show fit	iron-sulfur cluster scaffold protein
napFDAGHBC Show fit	1.91	napG RegulonDB EcoCyc Show fit napF RegulonDB EcoCyc Show fit napD RegulonDB EcoCyc Show fit napC RegulonDB EcoCyc Show fit napB RegulonDB EcoCyc Show fit napA RegulonDB EcoCyc Show fit napH RegulonDB EcoCyc Show fit	ferredoxin-type protein ferredoxin-type protein signal peptide-binding chaperone for NapA periplasmic nitrate reductase, cytochrome c protein subunit of periplasmic nitrate reductase, cytochrome c₅₅₀ protein large subunit of periplasmic nitrate reductase, molybdoprotein ferredoxin-type protein
erpA Show fit	1.84	erpA RegulonDB EcoCyc Show fit	essential respiratory protein A
ydiU Show fit	1.31	ydiU RegulonDB EcoCyc Show fit	conserved protein

Showing 1 to 5 of 5 entries

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Log-likelihood per target	Total log-likelihood	Term	Description
0.9	5.3	GO:0097428	protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.6	1.9	GO:0070201	regulation of protein localization(GO:0032880) regulation of protein transport(GO:0051223) regulation of establishment of protein localization(GO:0070201)

Showing 1 to 2 of 2 entries

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Log-likelihood per target	Total log-likelihood	Term	Description
0.6	2.4	GO:0016530	metallochaperone activity(GO:0016530)
0.6	1.9	GO:0008940	nitrate reductase activity(GO:0008940)
0.0	0.8	GO:0051537	2 iron, 2 sulfur cluster binding(GO:0051537)
0.0	0.8	GO:0051539	4 iron, 4 sulfur cluster binding(GO:0051539)

Showing 1 to 4 of 4 entries