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GSE55662: Plasticity of transcriptional regulation under antibiotic stress
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Results for IdnR
Z-value: 1.18
Transcription factors associated with IdnR
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
idnR
|
idnR | IdnR transcriptional regulator |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| idnR | 0.88 | 4.1e-03 | Click! |
Activity profile of IdnR motif
Sorted Z-values of IdnR motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| idnK | 7.19 |
idnK
|
D-gluconate kinase, thermosensitive |
|
| gntKU | 4.40 |
gntK
gntU
|
D-gluconate kinase, thermostable gluconate transporter GntU |
|
| gntK | 3.72 |
gntK
|
D-gluconate kinase, thermostable |
|
| idnDOTR | 3.43 |
idnD
idnO
idnR
idnT
|
L-idonate 5-dehydrogenase 5-keto-D-gluconate 5-reductase IdnR transcriptional regulator L-idonate / 5-ketogluconate / gluconate transporter IdnT |
Network of associatons between targets according to the STRING database.
First level regulatory network of IdnR
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 3.1 | 15.3 | GO:0046177 | D-gluconate metabolic process(GO:0019521) D-gluconate catabolic process(GO:0046177) |
| 1.7 | 3.4 | GO:0042873 | aldonate transport(GO:0042873) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 7.8 | GO:0005887 | integral component of plasma membrane(GO:0005887) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 5.1 | 15.3 | GO:0046316 | gluconokinase activity(GO:0046316) |
| 0.9 | 3.4 | GO:0015128 | gluconate transmembrane transporter activity(GO:0015128) aldonate transmembrane transporter activity(GO:0042879) |