ISMARA results: GlpR

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GSE55662: Plasticity of transcriptional regulation under antibiotic stress

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Results for GlpR

Z-value: 1.71

Transcription factors associated with GlpR

Gene Symbol	Gene ID	Gene Info
glpR RegulonDB EcoCyc	glpR	GlpR DNA-binding transcriptional repressor

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
glpR		0.16	7.0e-01	Click!

Activity profile of GlpR motif

Sorted Z-values of GlpR motif

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Promoter	Log-likelihood	Gene	Gene Info
glpTQ Show fit	15.33	glpT RegulonDB EcoCyc Show fit glpQ RegulonDB EcoCyc Show fit	glycerol-3-phosphate:phosphate antiporter glycerophosphoryl diester phosphodiesterase, periplasmic
glpD Show fit	14.58	glpD RegulonDB EcoCyc Show fit	glycerol-3-phosphate dehydrogenase, aerobic
glpABC Show fit	13.34	glpA RegulonDB EcoCyc Show fit glpC RegulonDB EcoCyc Show fit glpB RegulonDB EcoCyc Show fit	anaerobic glycerol-3-phosphate dehydrogenase subunit A anaerobic glycerol-3-phosphate dehydrogenase subunit C anaerobic glycerol-3-phosphate dehydrogenase subunit B

Showing 1 to 3 of 3 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of GlpR

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
2.3	27.9	GO:0046434	organophosphate catabolic process(GO:0046434)
3.8	15.3	GO:0015748	organophosphate ester transport(GO:0015748)

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Gene overrepresentation in cellular component category:

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Log-likelihood per target	Total log-likelihood	Term	Description
1.3	27.9	GO:1990204	oxidoreductase complex(GO:1990204)
0.1	15.3	GO:0042597	periplasmic space(GO:0042597)

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Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
9.3	27.9	GO:0016901	oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor(GO:0016901)
3.2	9.7	GO:0015166	polyol transmembrane transporter activity(GO:0015166)

Showing 1 to 2 of 2 entries

Results for GlpR

Z-value: 1.71

Transcription factors associated with GlpR

Activity-expression correlation:

Activity profile of GlpR motif

Sorted Z-values of GlpR motif

Top targets:

Network of associatons between targets according to the STRING database.

First level regulatory network of GlpR

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category: