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GSE55662: Plasticity of transcriptional regulation under antibiotic stress

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Results for GlcC

Z-value: 1.12

Transcription factors associated with GlcC

Gene Symbol Gene ID Gene Info
glcC GlcC transcriptional dual regulator

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
glcC0.939.5e-04Click!

Activity profile of GlcC motif

Sorted Z-values of GlcC motif

Promoter Log-likelihood Transcript Gene Gene Info
glcC 14.50 GlcC transcriptional dual regulator
glcDEFGBA 3.62 glycolate oxidase, predicted FAD-linked subunit
glycolate oxidase, predicted FAD-binding subunit
glycolate oxidase, predicted iron-sulfur subunit
conserved protein
glycolate / lactate:H+ symporter
malate synthase G

Network of associatons between targets according to the STRING database.

First level regulatory network of GlcC

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 3.6 GO:0034308 primary alcohol metabolic process(GO:0034308) glyoxylate metabolic process(GO:0046487)
0.1 14.5 GO:2001141 regulation of transcription, DNA-templated(GO:0006355) regulation of nucleic acid-templated transcription(GO:1903506) regulation of RNA biosynthetic process(GO:2001141)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 3.6 GO:0005887 integral component of plasma membrane(GO:0005887)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.9 3.6 GO:0046912 glycolate transmembrane transporter activity(GO:0043879) transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer(GO:0046912)
0.1 14.5 GO:0003677 DNA binding(GO:0003677)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 3.6 REACTOME METABOLISM OF CARBOHYDRATES Genes involved in Metabolism of carbohydrates