GSE55662: Plasticity of transcriptional regulation under antibiotic stress
Gene Symbol | Gene ID | Gene Info |
---|---|---|
gadW
|
gadW | GadW DNA-binding transcriptional dual regulator |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
gadX | 2.63 |
gadX
|
GadX DNA-binding transcriptional dual regulator |
|
gadAX | 2.50 |
gadX
gadA
|
GadX DNA-binding transcriptional dual regulator glutamate decarboxylase A subunit |
|
gadXW | 2.14 |
gadW
gadX
|
GadW DNA-binding transcriptional dual regulator GadX DNA-binding transcriptional dual regulator |
|
gadBC | 1.71 |
gadB
gadC
|
glutamate decarboxylase B subunit glutamic acid:4-aminobutyrate antiporter |
|
gadW | 1.50 |
gadW
|
GadW DNA-binding transcriptional dual regulator |
|
slp-dctR | 0.53 |
slp
dctR
|
starvation lipoprotein predicted DNA-binding transcriptional regulator |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.1 | 4.2 | GO:0051454 | pH elevation(GO:0045852) intracellular pH elevation(GO:0051454) |
0.2 | 0.5 | GO:0031329 | regulation of cellular catabolic process(GO:0031329) regulation of cellular carbohydrate catabolic process(GO:0043471) |
0.1 | 4.8 | GO:0045893 | positive regulation of transcription, DNA-templated(GO:0045893) positive regulation of RNA metabolic process(GO:0051254) positive regulation of RNA biosynthetic process(GO:1902680) positive regulation of nucleic acid-templated transcription(GO:1903508) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 7.3 | GO:0001140 | transcriptional activator activity, bacterial-type RNA polymerase core promoter proximal region sequence-specific binding(GO:0001140) |
0.1 | 1.7 | GO:0015297 | antiporter activity(GO:0015297) |
0.0 | 1.5 | GO:0003700 | transcription factor activity, sequence-specific DNA binding(GO:0003700) |