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GSE55662: Plasticity of transcriptional regulation under antibiotic stress

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Results for Dan

Z-value: 0.80

Transcription factors associated with Dan

Gene Symbol Gene ID Gene Info
ttdR
ttdR Dan transcriptional activator

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
ttdR0.581.3e-01Click!

Activity profile of Dan motif

Sorted Z-values of Dan motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
ttdABT 6.54
ttdA
ttdB
ttdT
L-tartrate dehydratase, α subunit
L-tartrate dehydratase, β subunit
tartrate:succinate antiporter
ttdR 2.37
ttdR
Dan transcriptional activator

Network of associatons between targets according to the STRING database.

First level regulatory network of Dan

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 6.5 GO:0042710 biofilm formation(GO:0042710)
0.0 2.4 GO:1902680 positive regulation of transcription, DNA-templated(GO:0045893) positive regulation of RNA metabolic process(GO:0051254) positive regulation of RNA biosynthetic process(GO:1902680) positive regulation of nucleic acid-templated transcription(GO:1903508)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 6.5 GO:0005886 plasma membrane(GO:0005886)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 6.5 GO:0015297 antiporter activity(GO:0015297)
0.0 2.4 GO:0043565 sequence-specific DNA binding(GO:0043565)