GSE55662: Plasticity of transcriptional regulation under antibiotic stress

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
betI Links RegulonDB EcoCyc	betI	BetI DNA-binding transcriptional repressor

Gene	Promoter	Pearson corr. coef.	P-value	Plot
betI		0.59	1.3e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
betIBA Show fit	6.33		betB Links RegulonDB EcoCyc Show fit betI Links RegulonDB EcoCyc Show fit betA Links RegulonDB EcoCyc Show fit	betaine aldehyde dehydrogenase BetI DNA-binding transcriptional repressor choline dehydrogenase
betT Show fit	5.66		betT Links RegulonDB EcoCyc Show fit	choline:H+ symporter

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
1.6	6.3	GO:0006577	amino-acid betaine metabolic process(GO:0006577)
0.7	5.7	GO:0015696	ammonium transport(GO:0015696)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	5.7	GO:0005887	integral component of plasma membrane(GO:0005887)
0.0	6.3	GO:0016020	membrane(GO:0016020)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
1.1	6.3	GO:0004029	aldehyde dehydrogenase (NAD) activity(GO:0004029)
0.7	5.7	GO:0015665	ammonium transmembrane transporter activity(GO:0008519) alcohol transmembrane transporter activity(GO:0015665)